Gene detail

Detail information of GWHGAAEX009573/evm.TU.scaffold_25.187

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428306334\|ref\|YP_007143159.1\|	2.00E-34	heparan-alpha-glucosaminide N-acetyltransferase [Crinalium epipsammum PCC 9333]
KOG	KOG4683	4.00E-105	Uncharacterized conserved protein
nr	gi\|743833005\|ref\|XP_010935136.1\|	0	PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0RXV7\|M0RXV7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P07490_001}
TAIR	AT5G27730	4.00E-105	Protein of unknown function (DUF1624)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000030	5849859	5927955	+

Transcript Sequence
>GWHTAAEX009573 GGAGACAGATTGTTTGATCGGTTTGCGCTTCCTTTCATTGCCTGAACTTCACATCATCGTAGGCCTCTGTAAATGGCGGATTACGTCCCACTGAGTGGAGGCCAAGACCAGGAGGCGAAAACCCTGGATAGAAAAGGAAAGAGACCTCGTCTCGCTTCTCTTGATGTTTTTCGCGGTCTCTCCATTGCTCTTATGATATTTGTTGACTATGCTGGCTCACTTTTTCCATTTGTTGCCCACTCTCCATGGCATGGCTTACAGTTAGCTGATTTTGTGACACCATTTTTTCTGTTTATCGCTGGAATATCTCTTTCACTTGTTTACAAGAAAACATCAAACAGATTACAAGCAACACAACAAGCAACGTTGAGGGCATTAAAACTTTTTCTTCTTGGTATTCTGTTACAAGGTGGCTTTTTTCATGGAGTAAATAATCTATCATTTGGTATTGATGTCGAAAAAATTCGCTGGTCTGGTATTTTGCAGAGGATAGGTGTTGGGTACATTGTTGCAGCCTTATGTGAAATATGGCTTCCAAATCTTTCGAGGAATGCAGAGCACACAGCTTTTTTTCTCAGAAACTATTTTTGTCATTGGTTATTTTTGGTCTCATTATCTGGAATATATTTGGGTTTGCTATATGGCTTGTATGTACCAGATTGGCAATTTGGAGTTGAACAAGCTGCCTTGTCAATCGCTCATAAGAATGGCAACCATATAATAAAAAAGGTTCGATGTGGGGCTAGAGGTGATCTTGGTCCAGCGTGCAACTCTGCTGGAATGATTGATCGCTATATTCTTGGAATTGAACACTTGTATAAGAAACCGGCTTACAGGAATCTTAATGTTTGTCAGAATACTGAAAATGATGACATCTCAGTTAACTTGCCTTCATGGTGTCTAGCCCCATTTGATCCTGAAGGGCTTTTAAGTTCCTTGATGGCTGTGGGGACATGCATCCTTGGCCTTCATTATGGTCACGTCCTTGTGCAGCTTGAGGATCACAGGGCTCGCCTCACCCAATGGCTGCAATTTTCAGTTTCAATTTTTGTGTTTGGTTTATTTCTTAATCTTATAGGTGATCCTATAAACAAACAATTATATACTGTTAGTTATACCCTTTTAACGGCTGGCTCTGCAGGCCTCATTTTCTGTGTTCTGTACTTAATGGTTGATGTTGGTAGATACCGGTGCCTCACCTATGTTTTAGAATGGATGGGGAGGCATTCTCTGGACATCTTTATTCTTGTACCATCCAACATAGCCATCATTGTTCTTCAAGGATTTTATTGGAAACACCCCAAAAACAATATTGTAAGTGTACAATTCATACGTGCATACATGTATTTAAGCAAGAGCACAAACACGCTTTGTGCTCAAATTGAGTCACATGAACATGAATCCAATTTGGTCAATCTATTGAATCACAGGTCATTTGATGAATCAGGTAGAGGACAACCCGATTTTAATCTATGGCCCTTTTTATATTCTGAATAATCTTGTTTAAATCGGGTTAGTTCATTTTAAAAAAATTATAAAAATAAAAATTTTTAGTTTATTATATGGAAATATCAGAAGTTAGCTAATGAATTTGCCCTTATTAAAAAATAATAGAATAATCAAATAAGAAAGGTTTAGCATTGATGTTATTGATCAAGCATATTGAATTACTTGTATAACTGTTAATATTTTTTATTATTAAATATTCAAAACTGTTAACCAAACAACAGAGCAATGCATTGAAATATGTATATTCTCGTACAAGATTGTTAACACTTCAAGGTCAAGCAACATGCTTCCTGTTGAGTGTTCAATATAGCTTAACATTACCATGAGATGATTAAATGATTAATAAATAAAATAAATACCTTGTGAGATTGTTAGATTCATCATTTTTTCCTTTAAATTGTTTGCTCCTTTGTATTCATCGAGCTGCATAAAACTTGAGGTGATTTAAGGTAGTGATAATATCAAGGGCTTAATTATCTGTAAATTGTTTGTAATAATATTTTTTTGAAAATCTGTTTACTACAATTTGTTAATGGCTTGATGTCAATTTATAAATACTATAGTTATCATGGTTCTAACTTATAAATAGTGCATGAATAAGCACAAATAGTAGTGAATAATTAGTAAAAACTAACCGGACAAATCACAATCAATAAATTATAATATAGATTTTATTTTGGGGTAGCTGTAGTTGCCTCTAGACGTTGTGAAGTTGTTGTAGAGGGAGTTGCTGTTGTTGATGTTTGAATGCAATGTTGTAGAAAACCGACCACCGTAGCAGAAGTGATTTGCACTCGAGGATCGATGATGCGTTGACGGTTACTAATCAAACAACGAAATCACGAACACATCGAGATAAAGATCACAGCACAAGTACATTCATCAAAAAACTACATGCACATCCAAAGACAGATTTACGGGAAAAACTACGGAGCCACACCGACCAGAATATTCTTTAAGAATCTCGAAGAATATAGAGTTACAAAGAGCTTCACA

Network for GWHGAAEX009573

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07786.11	DUF1624	26	150	6.70E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K10532	HGSNAT	Metabolic pathways	map01100
		Glycosaminoglycan degradation	map00531
		Lysosome	map04142

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.320
SRP064423	SRR2545915	Juvenile tuber	6.580
SRP108465	SRR5643513	five period of Gastrodia elata	3.960
	SRR5643514	five period of Gastrodia elata	3.590
	SRR5643515	five period of Gastrodia elata	3.260
	SRR5643524	five period of Gastrodia elata	3.880
	SRR5643525	five period of Gastrodia elata	2.720
	SRR5643528	five period of Gastrodia elata	2.290
	SRR5643658	five period of Gastrodia elata	2.230
	SRR5643659	five period of Gastrodia elata	3.640
	SRR5643660	five period of Gastrodia elata	3.580
	SRR5643661	five period of Gastrodia elata	3.090
	SRR5643662	five period of Gastrodia elata	1.960
	SRR5643663	five period of Gastrodia elata	3.180
	SRR5643664	five period of Gastrodia elata	2.560
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.410
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.040
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.920
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.400
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.730
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	15.100
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.600
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.550
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.860
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.830
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.590
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.590
SRP279888	Gastro	Gastrodia elata tuber	7.67
	Juven	Juvenile tuber	8.11
	Mother_Gastro	Mother tuber of Gastrodia elata	7.75
	Mother_Juven	Mother tuber of Juvenile	9.03