Detail information of GWHGAAEX011492/evm.TU.scaffold_38.60
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|430744017|ref|YP_007203146.1| | 5.00E-16 | lysophospholipase [Singulisphaera acidiphila DSM 18658] |
| KOG | KOG2624 | 3.00E-78 | Triglyceride lipase-cholesterol esterase |
| nr | gi|672130692|ref|XP_008788885.1| | 1.47E-158 | PREDICTED: triacylglycerol lipase 2-like [Phoenix dactylifera] |
| Swissprot | tr|Q67ZU1|LIP2_ARATH | 6.00E-122 | Triacylglycerol lipase 2 (Precursor) |
| trEMBL | tr|K3YD81|K3YD81_SETIT | 4.00E-149 | Lipase {ECO:0000256|PIRNR:PIRNR000862} |
| TAIR | AT2G15230 | 3.00E-78 | lipase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000041 | 1832521 | 1837385 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011492
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04083.15 | Abhydro_lipase | 57 | 111 | 5.50E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01052 | LIPA | Steroid biosynthesis | map00100 |
| Lysosome | map04142 | ||
| Cholesterol metabolism | map04979 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006629 | Biological Process | lipid metabolic process |
| GO:0016788 | Molecular Function | hydrolase activity, acting on ester bonds |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 19.540 |
| SRR2545915 | Juvenile tuber | 4.930 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.660 |
| SRR5643514 | five period of Gastrodia elata | 2.430 | |
| SRR5643515 | five period of Gastrodia elata | 1.100 | |
| SRR5643524 | five period of Gastrodia elata | 2.280 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 2.340 | |
| SRR5643660 | five period of Gastrodia elata | 3.550 | |
| SRR5643661 | five period of Gastrodia elata | 3.410 | |
| SRR5643662 | five period of Gastrodia elata | 7.600 | |
| SRR5643663 | five period of Gastrodia elata | 2.030 | |
| SRR5643664 | five period of Gastrodia elata | 4.090 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.040 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.740 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.220 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.910 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.850 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.790 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.160 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.780 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.070 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.390 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.390 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 20.73 |
| Juven | Juvenile tuber | 68.80 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.04 | |
| Mother_Juven | Mother tuber of Juvenile | 35.70 |