Detail information of GWHGAAEX012282/evm.TU.scaffold_42.83


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005019630851964001+
Transcript Sequence

Network for GWHGAAEX012282

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02154ATPeV0A, ATP6N Metabolic pathways map01100
Oxidative phosphorylationmap00190
Phagosomemap04145
Lysosomemap04142
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.580
SRR5643515five period of Gastrodia elata2.680
SRR5643524five period of Gastrodia elata0.560
SRR5643525five period of Gastrodia elata1.080
SRR5643528five period of Gastrodia elata0.760
SRR5643658five period of Gastrodia elata1.740
SRR5643659five period of Gastrodia elata1.130
SRR5643660five period of Gastrodia elata1.300
SRR5643661five period of Gastrodia elata1.920
SRR5643662five period of Gastrodia elata3.450
SRR5643663five period of Gastrodia elata1.470
SRR5643664five period of Gastrodia elata6.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.010
SRR6049655Rhizomagastrodiae_C368-T10_good_12.400
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.770
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_13.520
SRR6049665Rhizomagastrodiae_C368-T10_good_13.520
SRP279888GastroGastrodia elata tuber 3.90
JuvenJuvenile tuber1.96
Mother_GastroMother tuber of Gastrodia elata 4.14
Mother_JuvenMother tuber of Juvenile 0.00