Detail information of GWHGAAEX012800/evm.TU.scaffold_46.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|88604358|ref|YP_504536.1|3.00E-29peptidase C1A, papain [Methanospirillum hungatei JF-1]
KOGKOG15423.00E-175Cysteine proteinase Cathepsin F
nrgi|15705865|gb|AAL05851.1|AF411121_10cysteine proteinase precursor [Sandersonia aurantiaca]
Swissprottr|Q10716|CYSP1_MAIZE5.00E-178Cysteine proteinase 1 (Precursor)
trEMBLtr|Q945R8|Q945R8_SANAU0Cysteine proteinase {ECO:0000313|EMBL:AAL05851.1} (Fragment)
TAIRAT2G214303.00E-175Papain family cysteine protease

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004235470923554069-
Transcript Sequence

Network for GWHGAAEX012800

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08246.11Inhibitor_I29531091.20E-11
PF00112.22Peptidase_C11373606.20E-73
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01373CTSF Lysosome map04142
Apoptosismap04210
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008234Molecular Functioncysteine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms129.150
SRR2545915Juvenile tuber92.120
SRP108465SRR5643513five period of Gastrodia elata162.950
SRR5643514five period of Gastrodia elata180.350
SRR5643515five period of Gastrodia elata156.790
SRR5643524five period of Gastrodia elata193.290
SRR5643525five period of Gastrodia elata386.550
SRR5643528five period of Gastrodia elata495.180
SRR5643658five period of Gastrodia elata446.610
SRR5643659five period of Gastrodia elata176.590
SRR5643660five period of Gastrodia elata147.640
SRR5643661five period of Gastrodia elata173.520
SRR5643662five period of Gastrodia elata145.640
SRR5643663five period of Gastrodia elata201.000
SRR5643664five period of Gastrodia elata154.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1103.320
SRR6049655Rhizomagastrodiae_C368-T10_good_1117.360
SRR6049656Rhizomagastrodiae_C368-T07_good_1122.140
SRR6049657Rhizomagastrodiae_C368-T07_good_1112.200
SRR6049658Rhizomagastrodiae_C368-T04_good_1102.420
SRR6049659Rhizomagastrodiae_C368-T04_good_1113.660
SRR6049660Rhizomagastrodiae_C368-T01_good_1119.790
SRR6049661Rhizomagastrodiae_C368-T04_good_1106.360
SRR6049662Rhizomagastrodiae_C368-T01_good_1150.930
SRR6049663Rhizomagastrodiae_C368-T01_good_1128.360
SRR6049664Rhizomagastrodiae_C368-T10_good_1153.710
SRR6049665Rhizomagastrodiae_C368-T10_good_1153.710
SRP279888GastroGastrodia elata tuber 148.95
JuvenJuvenile tuber142.40
Mother_GastroMother tuber of Gastrodia elata 222.50
Mother_JuvenMother tuber of Juvenile 170.12