Detail information of GWHGAAEX015524/evm.TU.scaffold_68.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|390951925|ref|YP_006415684.1|4.00E-33cysteine protease [Thiocystis violascens DSM 198]
KOGKOG15431.00E-175Cysteine proteinase Cathepsin L
nrgi|743887063|ref|XP_010910298.1|0PREDICTED: oryzain gamma chain-like [Elaeis guineensis]
Swissprottr|Q10717|CYSP2_MAIZE0Cysteine proteinase 2 (Precursor)
trEMBLtr|A6N8G0|A6N8G0_ELAGV0Cysteine proteinase {ECO:0000313|EMBL:ABR19829.1}
TAIRAT5G603601.00E-175aleurain-like protease

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006420968892100140-
Transcript Sequence

Network for GWHGAAEX015524

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08246.11Inhibitor_I29571133.70E-14
PF00112.22Peptidase_C11413561.90E-75
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01366CTSH Lysosome map04142
Apoptosismap04210

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008234Molecular Functioncysteine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1332.620
SRR2545915Juvenile tuber323.860
SRP108465SRR5643513five period of Gastrodia elata674.010
SRR5643514five period of Gastrodia elata630.530
SRR5643515five period of Gastrodia elata443.090
SRR5643524five period of Gastrodia elata495.640
SRR5643525five period of Gastrodia elata4663.110
SRR5643528five period of Gastrodia elata5380.030
SRR5643658five period of Gastrodia elata2826.910
SRR5643659five period of Gastrodia elata163.830
SRR5643660five period of Gastrodia elata172.920
SRR5643661five period of Gastrodia elata135.080
SRR5643662five period of Gastrodia elata77.490
SRR5643663five period of Gastrodia elata108.920
SRR5643664five period of Gastrodia elata146.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1888.040
SRR6049655Rhizomagastrodiae_C368-T10_good_1599.430
SRR6049656Rhizomagastrodiae_C368-T07_good_1931.600
SRR6049657Rhizomagastrodiae_C368-T07_good_11563.430
SRR6049658Rhizomagastrodiae_C368-T04_good_14013.520
SRR6049659Rhizomagastrodiae_C368-T04_good_14670.990
SRR6049660Rhizomagastrodiae_C368-T01_good_12035.780
SRR6049661Rhizomagastrodiae_C368-T04_good_12439.230
SRR6049662Rhizomagastrodiae_C368-T01_good_1607.880
SRR6049663Rhizomagastrodiae_C368-T01_good_11536.690
SRR6049664Rhizomagastrodiae_C368-T10_good_1727.830
SRR6049665Rhizomagastrodiae_C368-T10_good_1727.830
SRP279888GastroGastrodia elata tuber 326.92
JuvenJuvenile tuber186.28
Mother_GastroMother tuber of Gastrodia elata 1,790.51
Mother_JuvenMother tuber of Juvenile 503.74