Detail information of GWHGAAEX015930/evm.TU.scaffold_71.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG09342.00E-96Clathrin adaptor complex, small subunit
nrgi|593705170|ref|XP_007152949.1|1.08E-96hypothetical protein PHAVU_004G173800g [Phaseolus vulgaris]
Swissprottr|O82201|AP4S_ARATH6.00E-97AP-4 complex subunit sigma
trEMBLtr|V7C6E3|V7C6E3_PHAVU4.00E-97Uncharacterized protein {ECO:0000313|EMBL:ESW24943.1}
TAIRAT2G197902.00E-96SNARE-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000074665131713483-
Transcript Sequence

Network for GWHGAAEX015930

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01217.19Clat_adaptor_s31417.80E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12403AP4S1 Lysosome map04142

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.930
SRR2545915Juvenile tuber44.960
SRP108465SRR5643513five period of Gastrodia elata72.380
SRR5643514five period of Gastrodia elata78.470
SRR5643515five period of Gastrodia elata70.340
SRR5643524five period of Gastrodia elata79.000
SRR5643525five period of Gastrodia elata106.000
SRR5643528five period of Gastrodia elata124.090
SRR5643658five period of Gastrodia elata106.620
SRR5643659five period of Gastrodia elata71.070
SRR5643660five period of Gastrodia elata77.510
SRR5643661five period of Gastrodia elata74.470
SRR5643662five period of Gastrodia elata71.470
SRR5643663five period of Gastrodia elata75.350
SRR5643664five period of Gastrodia elata76.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.700
SRR6049655Rhizomagastrodiae_C368-T10_good_1104.510
SRR6049656Rhizomagastrodiae_C368-T07_good_145.880
SRR6049657Rhizomagastrodiae_C368-T07_good_147.650
SRR6049658Rhizomagastrodiae_C368-T04_good_131.780
SRR6049659Rhizomagastrodiae_C368-T04_good_137.880
SRR6049660Rhizomagastrodiae_C368-T01_good_134.710
SRR6049661Rhizomagastrodiae_C368-T04_good_130.400
SRR6049662Rhizomagastrodiae_C368-T01_good_140.400
SRR6049663Rhizomagastrodiae_C368-T01_good_133.190
SRR6049664Rhizomagastrodiae_C368-T10_good_179.830
SRR6049665Rhizomagastrodiae_C368-T10_good_179.830
SRP279888GastroGastrodia elata tuber 81.70
JuvenJuvenile tuber63.80
Mother_GastroMother tuber of Gastrodia elata 70.65
Mother_JuvenMother tuber of Juvenile 76.07