Detail information of GWHGAAEX017395/evm.TU.scaffold_80.219


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13402.00E-53Prosaposin
nrgi|743782290|ref|XP_010921104.1|9.59E-70PREDICTED: proactivator polypeptide-like 1 isoform X1 [Elaeis guineensis]
trEMBLtr|Q5VQH7|Q5VQH7_ORYSJ9.00E-61cDNA clone:J013119N08, full insert sequence {ECO:0000313|EMBL:BAG90610.1}
TAIRAT3G517302.00E-53saposin B domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008443579184377365-
Transcript Sequence

Network for GWHGAAEX017395

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05184.14SapB_139741.90E-09
PF03489.16SapB_2801111.20E-05
PF05184.14SapB_11241601.30E-07
PF03489.16SapB_21661981.20E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12382PSAP, SGP1 Lysosome map04142

Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process
GO:0006665Biological Processsphingolipid metabolic process
GO:0005764Cellular Componentlysosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms342.350
SRR2545915Juvenile tuber380.230
SRP108465SRR5643513five period of Gastrodia elata225.780
SRR5643514five period of Gastrodia elata187.590
SRR5643515five period of Gastrodia elata194.000
SRR5643524five period of Gastrodia elata198.610
SRR5643525five period of Gastrodia elata354.690
SRR5643528five period of Gastrodia elata369.630
SRR5643658five period of Gastrodia elata421.950
SRR5643659five period of Gastrodia elata173.580
SRR5643660five period of Gastrodia elata219.580
SRR5643661five period of Gastrodia elata185.280
SRR5643662five period of Gastrodia elata227.190
SRR5643663five period of Gastrodia elata239.670
SRR5643664five period of Gastrodia elata282.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1236.170
SRR6049655Rhizomagastrodiae_C368-T10_good_1403.040
SRR6049656Rhizomagastrodiae_C368-T07_good_1189.490
SRR6049657Rhizomagastrodiae_C368-T07_good_1288.960
SRR6049658Rhizomagastrodiae_C368-T04_good_1208.720
SRR6049659Rhizomagastrodiae_C368-T04_good_1254.220
SRR6049660Rhizomagastrodiae_C368-T01_good_1211.800
SRR6049661Rhizomagastrodiae_C368-T04_good_1177.060
SRR6049662Rhizomagastrodiae_C368-T01_good_1143.900
SRR6049663Rhizomagastrodiae_C368-T01_good_1140.560
SRR6049664Rhizomagastrodiae_C368-T10_good_1198.860
SRR6049665Rhizomagastrodiae_C368-T10_good_1198.860
SRP279888GastroGastrodia elata tuber 310.72
JuvenJuvenile tuber170.74
Mother_GastroMother tuber of Gastrodia elata 455.66
Mother_JuvenMother tuber of Juvenile 268.61