Detail information of GWHGAAEX017806/evm.TU.scaffold_87.92


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25411.00E-145Palmitoyl protein thioesterase
nrgi|743778464|ref|XP_010919692.1|1.74E-160PREDICTED: palmitoyl-protein thioesterase 1 [Elaeis guineensis]
trEMBLtr|B6TEV5|B6TEV5_MAIZE2.00E-157Palmitoyl-protein thioesterase 1 {ECO:0000313|EMBL:ACG35638.1}
TAIRAT3G603401.00E-145alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008836896663785877+
Transcript Sequence

Network for GWHGAAEX017806

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02089.14Palm_thioest443111.60E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01074PPT Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Lysosomemap04142

Gene Ontology

GO term OntologyName
GO:0098599Molecular Functionpalmitoyl hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.740
SRR2545915Juvenile tuber25.980
SRP108465SRR5643513five period of Gastrodia elata23.710
SRR5643514five period of Gastrodia elata22.620
SRR5643515five period of Gastrodia elata22.680
SRR5643524five period of Gastrodia elata23.120
SRR5643525five period of Gastrodia elata36.210
SRR5643528five period of Gastrodia elata32.390
SRR5643658five period of Gastrodia elata41.660
SRR5643659five period of Gastrodia elata19.160
SRR5643660five period of Gastrodia elata19.350
SRR5643661five period of Gastrodia elata20.200
SRR5643662five period of Gastrodia elata18.070
SRR5643663five period of Gastrodia elata17.880
SRR5643664five period of Gastrodia elata20.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.630
SRR6049655Rhizomagastrodiae_C368-T10_good_120.520
SRR6049656Rhizomagastrodiae_C368-T07_good_122.490
SRR6049657Rhizomagastrodiae_C368-T07_good_121.680
SRR6049658Rhizomagastrodiae_C368-T04_good_120.430
SRR6049659Rhizomagastrodiae_C368-T04_good_119.620
SRR6049660Rhizomagastrodiae_C368-T01_good_122.080
SRR6049661Rhizomagastrodiae_C368-T04_good_122.110
SRR6049662Rhizomagastrodiae_C368-T01_good_119.910
SRR6049663Rhizomagastrodiae_C368-T01_good_119.540
SRR6049664Rhizomagastrodiae_C368-T10_good_120.290
SRR6049665Rhizomagastrodiae_C368-T10_good_120.290
SRP279888GastroGastrodia elata tuber 18.46
JuvenJuvenile tuber15.26
Mother_GastroMother tuber of Gastrodia elata 13.95
Mother_JuvenMother tuber of Juvenile 12.90