Detail information of GWHGAAEX018624/evm.TU.scaffold_96.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25413.00E-24Palmitoyl protein thioesterase
nrgi|727529890|ref|XP_010439999.1|3.89E-26PREDICTED: palmitoyl-protein thioesterase 3-like [Camelina sativa]
trEMBLtr|I1I671|I1I671_BRADI4.00E-26Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G33500.1}
TAIRAT3G603403.00E-24alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009135929863602787-
Transcript Sequence

Network for GWHGAAEX018624

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02089.14Palm_thioest361302.00E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01074PPT Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Lysosomemap04142

Gene Ontology

GO term OntologyName
GO:0098599Molecular Functionpalmitoyl hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.850
SRR2545915Juvenile tuber4.010
SRP108465SRR5643513five period of Gastrodia elata2.110
SRR5643514five period of Gastrodia elata2.930
SRR5643515five period of Gastrodia elata0.690
SRR5643524five period of Gastrodia elata1.220
SRR5643525five period of Gastrodia elata1.900
SRR5643528five period of Gastrodia elata2.780
SRR5643658five period of Gastrodia elata4.260
SRR5643659five period of Gastrodia elata1.290
SRR5643660five period of Gastrodia elata2.070
SRR5643661five period of Gastrodia elata1.620
SRR5643662five period of Gastrodia elata1.130
SRR5643663five period of Gastrodia elata1.720
SRR5643664five period of Gastrodia elata1.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.190
SRR6049655Rhizomagastrodiae_C368-T10_good_10.880
SRR6049656Rhizomagastrodiae_C368-T07_good_12.220
SRR6049657Rhizomagastrodiae_C368-T07_good_11.880
SRR6049658Rhizomagastrodiae_C368-T04_good_12.110
SRR6049659Rhizomagastrodiae_C368-T04_good_12.060
SRR6049660Rhizomagastrodiae_C368-T01_good_12.250
SRR6049661Rhizomagastrodiae_C368-T04_good_12.270
SRR6049662Rhizomagastrodiae_C368-T01_good_12.670
SRR6049663Rhizomagastrodiae_C368-T01_good_12.260
SRR6049664Rhizomagastrodiae_C368-T10_good_14.380
SRR6049665Rhizomagastrodiae_C368-T10_good_14.380
SRP279888GastroGastrodia elata tuber 3.44
JuvenJuvenile tuber2.58
Mother_GastroMother tuber of Gastrodia elata 1.47
Mother_JuvenMother tuber of Juvenile 1.33