Detail information of GWHGAAEX018625/evm.TU.scaffold_96.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25418.00E-51Palmitoyl protein thioesterase
nrgi|565440201|ref|XP_006282773.1|2.36E-49hypothetical protein CARUB_v10006201mg [Capsella rubella]
trEMBLtr|R0F2V4|R0F2V4_9BRAS9.00E-50Uncharacterized protein {ECO:0000313|EMBL:EOA15671.1}
TAIRAT4G174838.00E-51alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009136587133704502-
Transcript Sequence

Network for GWHGAAEX018625

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02089.14Palm_thioest261411.90E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01074PPT Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Lysosomemap04142

Gene Ontology

GO term OntologyName
GO:0098599Molecular Functionpalmitoyl hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.220
SRR2545915Juvenile tuber0.760
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.220
SRR5643515five period of Gastrodia elata0.140
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata4.240
SRR5643528five period of Gastrodia elata3.290
SRR5643658five period of Gastrodia elata6.320
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.620
SRR6049655Rhizomagastrodiae_C368-T10_good_14.150
SRR6049656Rhizomagastrodiae_C368-T07_good_12.670
SRR6049657Rhizomagastrodiae_C368-T07_good_10.420
SRR6049658Rhizomagastrodiae_C368-T04_good_15.840
SRR6049659Rhizomagastrodiae_C368-T04_good_13.120
SRR6049660Rhizomagastrodiae_C368-T01_good_11.740
SRR6049661Rhizomagastrodiae_C368-T04_good_11.860
SRR6049662Rhizomagastrodiae_C368-T01_good_16.760
SRR6049663Rhizomagastrodiae_C368-T01_good_19.510
SRR6049664Rhizomagastrodiae_C368-T10_good_19.420
SRR6049665Rhizomagastrodiae_C368-T10_good_19.420
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.13
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.29