Detail information of GWHGAAEX018626/evm.TU.scaffold_96.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25414.00E-60Palmitoyl protein thioesterase
nrgi|729310584|ref|XP_010529980.1|6.66E-63PREDICTED: palmitoyl-protein thioesterase 1-like [Tarenaya hassleriana]
trEMBLtr|A0A022PYG7|A0A022PYG7_ERYGU3.00E-62Uncharacterized protein {ECO:0000313|EMBL:EYU19275.1}
TAIRAT3G603404.00E-60alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009140144174070440-
Transcript Sequence

Network for GWHGAAEX018626

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02089.14Palm_thioest71832.10E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01074PPT Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Lysosomemap04142

Gene Ontology

GO term OntologyName
GO:0098599Molecular Functionpalmitoyl hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.420
SRR2545915Juvenile tuber37.680
SRP108465SRR5643513five period of Gastrodia elata25.440
SRR5643514five period of Gastrodia elata24.280
SRR5643515five period of Gastrodia elata32.120
SRR5643524five period of Gastrodia elata21.550
SRR5643525five period of Gastrodia elata49.460
SRR5643528five period of Gastrodia elata43.360
SRR5643658five period of Gastrodia elata39.390
SRR5643659five period of Gastrodia elata24.220
SRR5643660five period of Gastrodia elata27.430
SRR5643661five period of Gastrodia elata19.720
SRR5643662five period of Gastrodia elata27.830
SRR5643663five period of Gastrodia elata35.840
SRR5643664five period of Gastrodia elata27.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.880
SRR6049655Rhizomagastrodiae_C368-T10_good_120.850
SRR6049656Rhizomagastrodiae_C368-T07_good_133.440
SRR6049657Rhizomagastrodiae_C368-T07_good_127.200
SRR6049658Rhizomagastrodiae_C368-T04_good_147.890
SRR6049659Rhizomagastrodiae_C368-T04_good_137.530
SRR6049660Rhizomagastrodiae_C368-T01_good_136.330
SRR6049661Rhizomagastrodiae_C368-T04_good_132.170
SRR6049662Rhizomagastrodiae_C368-T01_good_141.620
SRR6049663Rhizomagastrodiae_C368-T01_good_145.570
SRR6049664Rhizomagastrodiae_C368-T10_good_164.590
SRR6049665Rhizomagastrodiae_C368-T10_good_164.590
SRP279888GastroGastrodia elata tuber 40.91
JuvenJuvenile tuber31.28
Mother_GastroMother tuber of Gastrodia elata 61.13
Mother_JuvenMother tuber of Juvenile 31.49