Detail information of GWHGAAEX018892/evm.TU.scaffold_99.104


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29570Vacuolar H+-ATPase V0 sector, subunit d
nrgi|567877009|ref|XP_006431094.1|0hypothetical protein CICLE_v10012084mg [Citrus clementina]
Swissprottr|Q9LHA4|VA0D2_ARATH0V-type proton ATPase subunit d2
trEMBLtr|A0A067G267|A0A067G267_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO72500.1}
TAIRAT3G287150ATPase, V0/A0 complex, subunit C/D

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009817448571761137-
Transcript Sequence

Network for GWHGAAEX018892

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01992.15vATP-synt_AC39163443.00E-113
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02146ATPeV0D, ATP6D Metabolic pathways map01100
Oxidative phosphorylationmap00190
Phagosomemap04145
Lysosomemap04142
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:1902600Biological Processhydrogen ion transmembrane transport
GO:0015078Molecular Functionhydrogen ion transmembrane transporter activity
GO:0033179Cellular Componentproton-transporting V-type ATPase, V0 domain

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.760
SRR2545915Juvenile tuber52.300
SRP108465SRR5643513five period of Gastrodia elata32.000
SRR5643514five period of Gastrodia elata38.570
SRR5643515five period of Gastrodia elata38.700
SRR5643524five period of Gastrodia elata37.750
SRR5643525five period of Gastrodia elata34.490
SRR5643528five period of Gastrodia elata38.110
SRR5643658five period of Gastrodia elata40.590
SRR5643659five period of Gastrodia elata33.420
SRR5643660five period of Gastrodia elata31.210
SRR5643661five period of Gastrodia elata28.580
SRR5643662five period of Gastrodia elata29.840
SRR5643663five period of Gastrodia elata33.710
SRR5643664five period of Gastrodia elata27.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.910
SRR6049655Rhizomagastrodiae_C368-T10_good_144.220
SRR6049656Rhizomagastrodiae_C368-T07_good_143.700
SRR6049657Rhizomagastrodiae_C368-T07_good_133.830
SRR6049658Rhizomagastrodiae_C368-T04_good_135.820
SRR6049659Rhizomagastrodiae_C368-T04_good_135.910
SRR6049660Rhizomagastrodiae_C368-T01_good_136.870
SRR6049661Rhizomagastrodiae_C368-T04_good_140.560
SRR6049662Rhizomagastrodiae_C368-T01_good_151.570
SRR6049663Rhizomagastrodiae_C368-T01_good_141.310
SRR6049664Rhizomagastrodiae_C368-T10_good_152.570
SRR6049665Rhizomagastrodiae_C368-T10_good_152.570
SRP279888GastroGastrodia elata tuber 35.36
JuvenJuvenile tuber35.12
Mother_GastroMother tuber of Gastrodia elata 37.26
Mother_JuvenMother tuber of Juvenile 26.99