Gene detail information of Glyur000001s00000034.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G05630.10phospholipase D P2
NRXP_004496027.10PREDICTED: phospholipase D p1-like, partial [Cicer arietinum]
COGYP_283621.12.00E-27phospholipase D/transphosphatidylase [Dechloromonas aromatica RCB]
Swissprottr|Q9M9W8|PLDP2_ARATH0Phospholipase D p2
trEMBLtr|A2Q157|A2Q157_MEDTR0Phospholipase D/Transphosphatidylase; Pleckstrin-like {ECO:0000313|EMBL:ABN05676.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00001225669236664-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01115PLD1_2 EC:3.1.4.4 Glycerophospholipid metabolism map00564
Ether lipid metabolismmap00565
Ras signaling pathwaymap04014
Phospholipase D signaling pathwaymap04072
Sphingolipid signaling pathwaymap04071
cAMP signaling pathwaymap04024
Endocytosismap04144
Fc gamma R-mediated phagocytosismap04666
GnRH signaling pathwaymap04912
Glutamatergic synapsemap04724
Choline metabolism in cancermap05231


Gene Ontology

molecular_function

GO:0003824  catalytic activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000001s00000034.1PF00614.17PLDc4304542.70E-07
Glyur000001s00000034.1PF13091.1PLDc_27108843.30E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.179
SRR1783600control2.284
SRR1783602moderate drought stress1.904
SRR1811619moderate drought stress1.937

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.263
DRR006520Root Summer glycyrrhizin high producing strain3.402
DRR006521Root Winter glycyrrhizin high producing strain0.668
DRR006522Root Winter glycyrrhizin high producing strain0.652
DRR006523Root Summer glycyrrhizin low producing strain6.037
DRR006524Root Summer glycyrrhizin low producing strain6.085
DRR006525Leaf Summer glycyrrhizin high producing strain1.499
DRR006526Leaf Summer glycyrrhizin high producing strain1.463

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.440
SRR2868004Drought Stress(Tissue:root)7.350
SRR2967015Control (Tissue:root)8.547

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.562
SRR9715740Leave0.772
SRR9715741Leave0.456
SRR9715739Root0.110
SRR9715742Root1.968
SRR9715743Root1.766

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.296
SRR8749028MeJA induced 9h0.226
SRR8749029MeJA induced 9h0.190
SRR8749030Uninduced0.118
SRR8749031Uninduced0.079
SRR8749032Uninduced0.123

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.980
SRR8400027Control-Root36.397

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved