Gene detail information of Glyur000011s00000723.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G23770.14.00E-89protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
NRKHN12737.10Leucine-rich repeat receptor protein kinase EXS [Glycine soja]
COGYP_003640725.12.00E-10serine/threonine protein kinase [Thermincola potens JR]
Swissprottr|O64825|LYK4_ARATH3.00E-102LysM domain receptor-like kinase 4 (Precursor)
trEMBLtr|K7MNT9|K7MNT9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G36630.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011580105582301-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000723.1PF07714.12Pkinase_Tyr3755175.40E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.079
SRR1783600control0.099
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.058
DRR006520Root Summer glycyrrhizin high producing strain0.058
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.452
DRR006524Root Summer glycyrrhizin low producing strain0.452
DRR006525Leaf Summer glycyrrhizin high producing strain0.251
DRR006526Leaf Summer glycyrrhizin high producing strain0.250

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.535
SRR2868004Drought Stress(Tissue:root)2.028
SRR2967015Control (Tissue:root)3.815

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.167
SRR9715740Leave0.103
SRR9715741Leave0.055
SRR9715739Root0.209
SRR9715742Root0.264
SRR9715743Root0.199

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.570
SRR8749028MeJA induced 9h0.953
SRR8749029MeJA induced 9h0.544
SRR8749030Uninduced2.036
SRR8749031Uninduced0.836
SRR8749032Uninduced0.151

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.062
SRR8400027Control-Root0.781

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved