Gene detail information of Glyur000013s00003210.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G56960.10phosphatidyl inositol monophosphate 5 kinase 4
NRXP_003554127.10PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 5-like [Glycine max]
COGYP_004253406.16.00E-35TIR protein [Odoribacter splanchnicus DSM 220712]
Swissprottr|Q9M1K2|PI5K4_ARATH0Phosphatidylinositol 4-phosphate 5-kinase 4
trEMBLtr|I1N8S8|I1N8S8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G31110.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00013199535203739-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00889PIP5K EC:2.7.1.68 Inositol phosphate metabolism map00562
MAPK signaling pathway - yeastmap04011
Phosphatidylinositol signaling systemmap04070
Phospholipase D signaling pathwaymap04072
Endocytosismap04144
Mitophagy - yeastmap04139
Regulation of actin cytoskeletonmap04810
Fc gamma R-mediated phagocytosismap04666
Choline metabolism in cancermap05231


Gene Ontology

biological_process

GO:0046488  phosphatidylinositol metabolic process


molecular_function

GO:0005524  ATP binding

GO:0016307  phosphatidylinositol phosphate kinase activity

GO:0016308  1-phosphatidylinositol-4-phosphate 5-kinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000013s00003210.1PF02493.15MORN76982.20E-07
Glyur000013s00003210.1PF02493.15MORN991200.00055
Glyur000013s00003210.1PF02493.15MORN1221431.10E-05
Glyur000013s00003210.1PF02493.15MORN1451661.90E-05
Glyur000013s00003210.1PF02493.15MORN1681888.70E-06
Glyur000013s00003210.1PF02493.15MORN1912138.80E-06
Glyur000013s00003210.1PF02493.15MORN2142352.10E-06
Glyur000013s00003210.1PF01504.13PIP5K4797689.60E-75


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.016
SRR1783600control0.071
SRR1783602moderate drought stress0.130
SRR1811619moderate drought stress0.146

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.187
DRR006520Root Summer glycyrrhizin high producing strain0.203
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.027
DRR006524Root Summer glycyrrhizin low producing strain0.095
DRR006525Leaf Summer glycyrrhizin high producing strain0.031
DRR006526Leaf Summer glycyrrhizin high producing strain0.047

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.420
SRR2868004Drought Stress(Tissue:root)0.296
SRR2967015Control (Tissue:root)0.501

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.027
SRR9715740Leave0.000
SRR9715741Leave0.006
SRR9715739Root0.001
SRR9715742Root0.000
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.153
SRR8749028MeJA induced 9h0.060
SRR8749029MeJA induced 9h0.047
SRR8749030Uninduced0.055
SRR8749031Uninduced0.033
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.242
SRR8400027Control-Root0.321

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved