Gene detail information of Glyur000017s00002388.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G39090.12.00E-156Papain family cysteine protease
NRXP_004507484.10PREDICTED: cysteine proteinase RD19a-like [Cicer arietinum]
COGYP_504536.12.00E-34peptidase C1A, papain [Methanospirillum hungatei JF-1]
Swissprottr|P43296|RD19A_ARATH0Cysteine proteinase RD19a (Precursor)
trEMBLtr|G7JIL2|G7JIL2_MEDTR0Papain family cysteine protease {ECO:0000313|EMBL:AES89195.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00017129665131759+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01373CTSF EC:3.4.22.41 Lysosome map04142
Apoptosismap04210


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008234  cysteine-type peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000017s00002388.1PF08246.7Inhibitor_I29471038.10E-12
Glyur000017s00002388.1PF00112.18Peptidase_C11313545.70E-75


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.002
SRR1783600control23.008
SRR1783602moderate drought stress18.560
SRR1811619moderate drought stress18.685

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain51.657
DRR006520Root Summer glycyrrhizin high producing strain51.661
DRR006521Root Winter glycyrrhizin high producing strain30.216
DRR006522Root Winter glycyrrhizin high producing strain28.979
DRR006523Root Summer glycyrrhizin low producing strain31.701
DRR006524Root Summer glycyrrhizin low producing strain31.645
DRR006525Leaf Summer glycyrrhizin high producing strain34.000
DRR006526Leaf Summer glycyrrhizin high producing strain34.044

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)66.692
SRR2868004Drought Stress(Tissue:root)65.393
SRR2967015Control (Tissue:root)66.691

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.687
SRR9715740Leave22.004
SRR9715741Leave25.693
SRR9715739Root25.180
SRR9715742Root45.583
SRR9715743Root45.284

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h48.400
SRR8749028MeJA induced 9h25.333
SRR8749029MeJA induced 9h28.804
SRR8749030Uninduced19.627
SRR8749031Uninduced22.139
SRR8749032Uninduced21.462

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.080
SRR8400027Control-Root37.292

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved