Gene detail information of Glyur000019s00002188.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G57530.10calcium-dependent protein kinase 32
NRNP_001266123.10calcium-dependent protein kinase 32-like [Cicer arietinum]
COGYP_642814.18.00E-31serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q6NLQ6|CDPKW_ARATH0Calcium-dependent protein kinase 32
trEMBLtr|Q7XZK4|Q7XZK4_CICAR0Calcium-dependent calmodulin-independent protein kinase isoform 2 {ECO:0000313|EMBL:AAP72282.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00019599558604247-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000019s00002188.2PF00069.20Pkinase623204.50E-74
Glyur000019s00002188.2PF13499.1EF-hand_73694276.90E-08
Glyur000019s00002188.2PF13499.1EF-hand_74405001.10E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.912
SRR1783600control22.185
SRR1783602moderate drought stress18.291
SRR1811619moderate drought stress18.620

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain58.919
DRR006520Root Summer glycyrrhizin high producing strain58.322
DRR006521Root Winter glycyrrhizin high producing strain12.887
DRR006522Root Winter glycyrrhizin high producing strain12.380
DRR006523Root Summer glycyrrhizin low producing strain123.937
DRR006524Root Summer glycyrrhizin low producing strain123.513
DRR006525Leaf Summer glycyrrhizin high producing strain31.394
DRR006526Leaf Summer glycyrrhizin high producing strain31.048

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)62.802
SRR2868004Drought Stress(Tissue:root)98.446
SRR2967015Control (Tissue:root)70.972

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave196.111
SRR9715740Leave128.779
SRR9715741Leave272.276
SRR9715739Root26.530
SRR9715742Root118.056
SRR9715743Root100.441

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h162.232
SRR8749028MeJA induced 9h160.568
SRR8749029MeJA induced 9h163.830
SRR8749030Uninduced218.161
SRR8749031Uninduced173.388
SRR8749032Uninduced146.906

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.916
SRR8400027Control-Root80.295

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved