Gene detail information of Glyur000020s00001740.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G02800.29.00E-121protein kinase 2B
NRXP_004514578.10PREDICTED: protein kinase 2A, chloroplastic-like [Cicer arietinum]
COGYP_001543675.14.00E-23serine/threonine protein kinase [Herpetosiphon aurantiacus DSM 785]
Swissprottr|O49840|APK2B_ARATH3.00E-158Protein kinase 2B, chloroplastic (Precursor)
trEMBLtr|A0A072UVS1|A0A072UVS1_MEDTR0Tyrosine kinase family protein {ECO:0000313|EMBL:KEH33506.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000206285865881+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000020s00001740.1PF07714.12Pkinase_Tyr753525.70E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.480
SRR1783600control2.471
SRR1783602moderate drought stress2.446
SRR1811619moderate drought stress2.411

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.491
DRR006520Root Summer glycyrrhizin high producing strain4.510
DRR006521Root Winter glycyrrhizin high producing strain9.213
DRR006522Root Winter glycyrrhizin high producing strain8.897
DRR006523Root Summer glycyrrhizin low producing strain11.092
DRR006524Root Summer glycyrrhizin low producing strain10.699
DRR006525Leaf Summer glycyrrhizin high producing strain0.316
DRR006526Leaf Summer glycyrrhizin high producing strain0.316

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.183
SRR2868004Drought Stress(Tissue:root)34.254
SRR2967015Control (Tissue:root)28.599

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.836
SRR9715740Leave3.439
SRR9715741Leave12.806
SRR9715739Root5.093
SRR9715742Root17.303
SRR9715743Root15.010

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.584
SRR8749028MeJA induced 9h30.124
SRR8749029MeJA induced 9h37.652
SRR8749030Uninduced76.130
SRR8749031Uninduced60.424
SRR8749032Uninduced72.073

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.074
SRR8400027Control-Root19.030

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved