Gene detail information of Glyur000020s00001762.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74740.10calcium-dependent protein kinase 30
NRXP_003522347.10PREDICTED: calcium-dependent protein kinase 10-like [Glycine max]
COGYP_004335296.18.00E-18serine/threonine protein kinase [Pseudonocardia dioxanivorans CB1190]
Swissprottr|Q9SSF8|CDPKU_ARATH0Calcium-dependent protein kinase 30
trEMBLtr|I1JWZ6|I1JWZ6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G34440.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00020183531187574-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000020s00001762.1PF07714.12Pkinase_Tyr701781.90E-12
Glyur000020s00001762.1PF00069.20Pkinase1862896.40E-26
Glyur000020s00001762.1PF13499.1EF-hand_73373954.40E-11
Glyur000020s00001762.1PF13499.1EF-hand_74104694.20E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.295
SRR1783600control5.072
SRR1783602moderate drought stress3.392
SRR1811619moderate drought stress3.562

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.527
DRR006520Root Summer glycyrrhizin high producing strain6.476
DRR006521Root Winter glycyrrhizin high producing strain13.478
DRR006522Root Winter glycyrrhizin high producing strain13.835
DRR006523Root Summer glycyrrhizin low producing strain15.635
DRR006524Root Summer glycyrrhizin low producing strain15.927
DRR006525Leaf Summer glycyrrhizin high producing strain27.840
DRR006526Leaf Summer glycyrrhizin high producing strain27.746

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.901
SRR2868004Drought Stress(Tissue:root)32.666
SRR2967015Control (Tissue:root)29.204

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave37.763
SRR9715740Leave37.384
SRR9715741Leave48.152
SRR9715739Root6.368
SRR9715742Root13.011
SRR9715743Root11.198

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.300
SRR8749028MeJA induced 9h31.576
SRR8749029MeJA induced 9h24.001
SRR8749030Uninduced21.571
SRR8749031Uninduced31.051
SRR8749032Uninduced20.410

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.441
SRR8400027Control-Root20.476

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved