Gene detail information of Glyur000020s00001785.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G02800.26.00E-146protein kinase 2B
NRXP_003609045.10Protein kinase 2B [Medicago truncatula]
COGYP_008151634.17.00E-25hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|O49840|APK2B_ARATH3.00E-180Protein kinase 2B, chloroplastic (Precursor)
trEMBLtr|G7JQX5|G7JQX5_MEDTR0Tyrosine kinase family protein {ECO:0000313|EMBL:AES91242.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00020296146299648-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000020s00001785.1PF07714.12Pkinase_Tyr882973.80E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.689
SRR1783600control1.758
SRR1783602moderate drought stress1.842
SRR1811619moderate drought stress1.806

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.728
DRR006520Root Summer glycyrrhizin high producing strain1.657
DRR006521Root Winter glycyrrhizin high producing strain1.778
DRR006522Root Winter glycyrrhizin high producing strain1.851
DRR006523Root Summer glycyrrhizin low producing strain1.931
DRR006524Root Summer glycyrrhizin low producing strain1.773
DRR006525Leaf Summer glycyrrhizin high producing strain0.981
DRR006526Leaf Summer glycyrrhizin high producing strain0.966

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.490
SRR2868004Drought Stress(Tissue:root)1.587
SRR2967015Control (Tissue:root)1.728

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.411
SRR9715740Leave0.177
SRR9715741Leave0.146
SRR9715739Root0.554
SRR9715742Root0.329
SRR9715743Root0.326

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.467
SRR8749028MeJA induced 9h0.889
SRR8749029MeJA induced 9h0.204
SRR8749030Uninduced0.638
SRR8749031Uninduced0.371
SRR8749032Uninduced0.778

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.929
SRR8400027Control-Root0.849

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved