Gene detail information of Glyur000026s00001894.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G04720.10calcium-dependent protein kinase 21
NRXP_007153943.10hypothetical protein PHAVU_003G078400g [Phaseolus vulgaris]
COGYP_642814.14.00E-26serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q9ZSA2|CDPKL_ARATH0Calcium-dependent protein kinase 21
trEMBLtr|V7C6Y3|V7C6Y3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW25937.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00026234895240067+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000026s00001894.1PF00069.20Pkinase983563.50E-68
Glyur000026s00001894.1PF13499.1EF-hand_74044631.00E-10
Glyur000026s00001894.1PF13499.1EF-hand_74765354.50E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control65.523
SRR1783600control66.548
SRR1783602moderate drought stress35.435
SRR1811619moderate drought stress35.312

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain76.904
DRR006520Root Summer glycyrrhizin high producing strain76.579
DRR006521Root Winter glycyrrhizin high producing strain39.798
DRR006522Root Winter glycyrrhizin high producing strain38.420
DRR006523Root Summer glycyrrhizin low producing strain35.901
DRR006524Root Summer glycyrrhizin low producing strain36.624
DRR006525Leaf Summer glycyrrhizin high producing strain16.982
DRR006526Leaf Summer glycyrrhizin high producing strain17.236

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)83.753
SRR2868004Drought Stress(Tissue:root)54.609
SRR2967015Control (Tissue:root)53.953

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.676
SRR9715740Leave11.045
SRR9715741Leave9.055
SRR9715739Root9.899
SRR9715742Root24.887
SRR9715743Root23.533

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h66.350
SRR8749028MeJA induced 9h53.013
SRR8749029MeJA induced 9h50.097
SRR8749030Uninduced5.232
SRR8749031Uninduced2.679
SRR8749032Uninduced7.599

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root94.415
SRR8400027Control-Root88.968

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved