Gene detail information of Glyur000028s00003508.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 155397 | 155838 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K02725 | PSMA1 | EC:3.4.25.1 | Proteasome | map03050 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.899 |
| SRR1783600 | control | 0.909 |
| SRR1783602 | moderate drought stress | 1.437 |
| SRR1811619 | moderate drought stress | 1.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.729 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.481 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.643 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.616 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.827 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.136 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.504 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.164 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.753 |
| SRR2967015 | Control (Tissue:root) | 4.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.320 |
| SRR9715740 | Leave | 3.017 |
| SRR9715741 | Leave | 1.972 |
| SRR9715739 | Root | 2.518 |
| SRR9715742 | Root | 0.643 |
| SRR9715743 | Root | 0.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.480 |
| SRR8749028 | MeJA induced 9h | 0.157 |
| SRR8749029 | MeJA induced 9h | 0.391 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.392 |
| SRR8400027 | Control-Root | 6.802 |