Gene detail information of Glyur000029s00003590.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G20410.10calmodulin-domain protein kinase 9
NRKHN02836.10Calcium-dependent protein kinase 9 [Glycine soja]
COGYP_642814.11.00E-29serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|P53683|CDPK2_ORYSJ0Calcium-dependent protein kinase isoform 2
trEMBLtr|I1N0P1|I1N0P1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G11030.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000296275567593-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000029s00003590.2PF00069.20Pkinase913495.60E-70
Glyur000029s00003590.2PF13499.1EF-hand_73964551.50E-12
Glyur000029s00003590.2PF13499.1EF-hand_74685345.20E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.299
SRR1783600control23.726
SRR1783602moderate drought stress21.480
SRR1811619moderate drought stress20.809

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain65.380
DRR006520Root Summer glycyrrhizin high producing strain61.507
DRR006521Root Winter glycyrrhizin high producing strain53.116
DRR006522Root Winter glycyrrhizin high producing strain51.285
DRR006523Root Summer glycyrrhizin low producing strain97.261
DRR006524Root Summer glycyrrhizin low producing strain96.089
DRR006525Leaf Summer glycyrrhizin high producing strain17.306
DRR006526Leaf Summer glycyrrhizin high producing strain16.780

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)51.548
SRR2868004Drought Stress(Tissue:root)57.435
SRR2967015Control (Tissue:root)42.119

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.430
SRR9715740Leave24.470
SRR9715741Leave33.794
SRR9715739Root8.687
SRR9715742Root54.854
SRR9715743Root45.645

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h119.729
SRR8749028MeJA induced 9h263.473
SRR8749029MeJA induced 9h160.092
SRR8749030Uninduced362.762
SRR8749031Uninduced172.436
SRR8749032Uninduced105.234

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.375
SRR8400027Control-Root46.296

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved