Gene detail information of Glyur000030s00002303.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G59610.10dynamin-like 3
NRXP_004499371.10PREDICTED: dynamin-2A-like [Cicer arietinum]
Swissprottr|Q9LQ55|DRP2B_ARATH0Dynamin-2B
trEMBLtr|I1MQT0|I1MQT0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G00480.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00030101235113465+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01528DNM EC:3.6.5.5 Phospholipase D signaling pathway map04072
Endocytosismap04144
Endocrine and other factor-regulated calcium reabsorptionmap04961
Synaptic vesicle cyclemap04721
Bacterial invasion of epithelial cellsmap05100


Gene Ontology

molecular_function

GO:0003924  GTPase activity

GO:0005525  GTP binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000030s00002303.1PF00350.18Dynamin_N382003.70E-29
Glyur000030s00002303.1PF01031.15Dynamin_M2695017.30E-28
Glyur000030s00002303.1PF00169.24PH5666861.50E-14
Glyur000030s00002303.1PF02212.13GED7248094.50E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.746
SRR1783600control15.675
SRR1783602moderate drought stress14.633
SRR1811619moderate drought stress14.661

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.468
DRR006520Root Summer glycyrrhizin high producing strain15.413
DRR006521Root Winter glycyrrhizin high producing strain13.028
DRR006522Root Winter glycyrrhizin high producing strain12.576
DRR006523Root Summer glycyrrhizin low producing strain14.952
DRR006524Root Summer glycyrrhizin low producing strain14.898
DRR006525Leaf Summer glycyrrhizin high producing strain13.897
DRR006526Leaf Summer glycyrrhizin high producing strain13.701

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.453
SRR2868004Drought Stress(Tissue:root)27.224
SRR2967015Control (Tissue:root)29.069

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.401
SRR9715740Leave16.140
SRR9715741Leave15.770
SRR9715739Root3.100
SRR9715742Root14.855
SRR9715743Root12.553

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.187
SRR8749028MeJA induced 9h18.643
SRR8749029MeJA induced 9h13.248
SRR8749030Uninduced7.906
SRR8749031Uninduced9.308
SRR8749032Uninduced7.672

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.881
SRR8400027Control-Root28.482

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved