Gene detail information of Glyur000037s00002607.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06740.11.00E-60Concanavalin A-like lectin protein kinase family protein
NRXP_004512301.10PREDICTED: probable L-type lectin-domain containing receptor kinase S.5-like [Cicer arietinum]
COGNP_864945.12.00E-12glucosesorbosone dehydrogenase [Rhodopirellula baltica SH 1]
Swissprottr|Q9FG33|LRKS5_ARATH2.00E-69Probable L-type lectin-domain containing receptor kinase S.5 (Precursor)
trEMBLtr|G7K2N4|G7K2N4_MEDTR0Lectin receptor kinase {ECO:0000313|EMBL:AES95397.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000378291886337-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000037s00002607.1PF00139.14Lectin_legB572832.10E-54
Glyur000037s00002607.1PF07714.12Pkinase_Tyr3664491.20E-17
Glyur000037s00002607.1PF07714.12Pkinase_Tyr4595570.00011


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.498
SRR1783600control16.686
SRR1783602moderate drought stress9.725
SRR1811619moderate drought stress10.083

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.812
DRR006520Root Summer glycyrrhizin high producing strain32.656
DRR006521Root Winter glycyrrhizin high producing strain2.953
DRR006522Root Winter glycyrrhizin high producing strain3.073
DRR006523Root Summer glycyrrhizin low producing strain96.757
DRR006524Root Summer glycyrrhizin low producing strain95.007
DRR006525Leaf Summer glycyrrhizin high producing strain13.336
DRR006526Leaf Summer glycyrrhizin high producing strain13.570

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.426
SRR2868004Drought Stress(Tissue:root)76.111
SRR2967015Control (Tissue:root)124.609

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.926
SRR9715740Leave9.981
SRR9715741Leave43.202
SRR9715739Root45.167
SRR9715742Root111.527
SRR9715743Root96.928

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h47.830
SRR8749028MeJA induced 9h60.853
SRR8749029MeJA induced 9h46.133
SRR8749030Uninduced75.657
SRR8749031Uninduced52.599
SRR8749032Uninduced37.691

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.038
SRR8400027Control-Root53.169

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved