Gene detail information of Glyur000053s00006426.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G15230.1 | 2.00E-149 | lipase 1 |
| NR | XP_004496935.1 | 0 | PREDICTED: triacylglycerol lipase 1-like [Cicer arietinum] |
| COG | NP_250462.1 | 2.00E-07 | EstX protein [Pseudomonas aeruginosa PAO1] |
| Swissprot | tr|Q71DJ5|LIP1_ARATH | 0 | Triacylglycerol lipase 1 (Precursor) |
| trEMBL | tr|V7BEZ8|V7BEZ8_PHAVU | 0 | Lipase {ECO:0000256|PIRNR:PIRNR000862} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00053 | 73227 | 77506 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01052 | LIPA | EC:3.1.1.13 | Steroid biosynthesis | map00100 |
| Lysosome | map04142 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000053s00006426.1 | PF04083.11 | Abhydro_lipase | 40 | 101 | 5.10E-15 |
| Glyur000053s00006426.1 | PF00561.15 | Abhydrolase_1 | 115 | 378 | 1.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.980 |
| SRR1783600 | control | 41.200 |
| SRR1783602 | moderate drought stress | 47.903 |
| SRR1811619 | moderate drought stress | 47.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.171 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.687 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.044 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.167 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.070 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.010 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.348 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 39.443 |
| SRR2868004 | Drought Stress(Tissue:root) | 44.703 |
| SRR2967015 | Control (Tissue:root) | 46.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 40.372 |
| SRR9715740 | Leave | 53.640 |
| SRR9715741 | Leave | 51.531 |
| SRR9715739 | Root | 29.858 |
| SRR9715742 | Root | 43.531 |
| SRR9715743 | Root | 37.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.158 |
| SRR8749028 | MeJA induced 9h | 4.979 |
| SRR8749029 | MeJA induced 9h | 3.237 |
| SRR8749030 | Uninduced | 1.432 |
| SRR8749031 | Uninduced | 0.363 |
| SRR8749032 | Uninduced | 0.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 47.409 |
| SRR8400027 | Control-Root | 56.901 |