Gene detail information of Glyur000058s00006157.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13690.10alpha-N-acetylglucosaminidase family / NAGLU family
NRXP_007138123.10hypothetical protein PHAVU_009G182100g [Phaseolus vulgaris]
COGYP_005009197.11.00E-79Alpha-N-acetylglucosaminidase, Alpha-L-fucosidase [Niastella koreensis GR20-10]
trEMBLtr|K7KVU8|K7KVU8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G19791.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00058198890208761-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH89


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01205NAGLU EC:3.2.1.50 Glycosaminoglycan degradation map00531
Lysosomemap04142


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000058s00006157.1PF12971.2NAGLU_N841795.90E-19
Glyur000058s00006157.1PF05089.7NAGLU2064824.10E-112
Glyur000058s00006157.1PF05089.7NAGLU4845111.80E-05
Glyur000058s00006157.1PF12972.2NAGLU_C5188111.10E-84


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.588
SRR1783600control2.760
SRR1783602moderate drought stress10.762
SRR1811619moderate drought stress10.538

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.557
DRR006520Root Summer glycyrrhizin high producing strain18.365
DRR006521Root Winter glycyrrhizin high producing strain25.976
DRR006522Root Winter glycyrrhizin high producing strain25.145
DRR006523Root Summer glycyrrhizin low producing strain9.689
DRR006524Root Summer glycyrrhizin low producing strain9.793
DRR006525Leaf Summer glycyrrhizin high producing strain1.964
DRR006526Leaf Summer glycyrrhizin high producing strain1.828

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.066
SRR2868004Drought Stress(Tissue:root)20.313
SRR2967015Control (Tissue:root)11.942

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.031
SRR9715740Leave3.465
SRR9715741Leave8.051
SRR9715739Root0.616
SRR9715742Root4.177
SRR9715743Root4.166

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.730
SRR8749028MeJA induced 9h59.866
SRR8749029MeJA induced 9h36.542
SRR8749030Uninduced51.399
SRR8749031Uninduced92.964
SRR8749032Uninduced42.944

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.431
SRR8400027Control-Root6.573

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved