Gene detail information of Glyur000060s00004738.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00330.13.00E-134calmodulin-binding receptor-like cytoplasmic kinase 2
NRNP_001235360.10calmodulin-binding receptor-like cytoplasmic kinase [Glycine max]
COGYP_003267608.11.00E-27serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|Q8VZJ9|CRCK2_ARATH1.00E-165Calmodulin-binding receptor-like cytoplasmic kinase 2
trEMBLtr|C6ZRW8|C6ZRW8_SOYBN0Calmodulin-binding receptor-like cytoplasmic kinase {ECO:0000313|EMBL:ACM89562.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00060196192199968-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000060s00004738.1PF00069.20Pkinase1444122.30E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.734
SRR1783600control11.685
SRR1783602moderate drought stress14.377
SRR1811619moderate drought stress14.311

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.055
DRR006520Root Summer glycyrrhizin high producing strain12.707
DRR006521Root Winter glycyrrhizin high producing strain4.858
DRR006522Root Winter glycyrrhizin high producing strain4.810
DRR006523Root Summer glycyrrhizin low producing strain15.570
DRR006524Root Summer glycyrrhizin low producing strain15.514
DRR006525Leaf Summer glycyrrhizin high producing strain19.893
DRR006526Leaf Summer glycyrrhizin high producing strain19.871

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.953
SRR2868004Drought Stress(Tissue:root)20.793
SRR2967015Control (Tissue:root)21.058

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.093
SRR9715740Leave18.771
SRR9715741Leave22.664
SRR9715739Root16.805
SRR9715742Root16.397
SRR9715743Root18.936

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.591
SRR8749028MeJA induced 9h18.971
SRR8749029MeJA induced 9h11.848
SRR8749030Uninduced20.310
SRR8749031Uninduced18.543
SRR8749032Uninduced16.529

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.808
SRR8400027Control-Root19.083

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved