Gene detail information of Glyur000066s00006235.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G45240.21.00E-152geminivirus rep interacting kinase 1
NRXP_004487125.10PREDICTED: serine/threonine-protein kinase GRIK1-like isoform X1 [Cicer arietinum]
COGYP_006403390.11.00E-27serine/threonine protein kinase [Sulfurospirillum barnesii SES-3]
Swissprottr|Q93V58|GRIK1_ARATH0Serine/threonine-protein kinase GRIK1
trEMBLtr|G7IRQ5|G7IRQ5_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:AES67471.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00066215650220762-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07359CAMKK2 EC:2.7.11.17 AMPK signaling pathway map04152
Autophagy - animalmap04140
Adipocytokine signaling pathwaymap04920
Oxytocin signaling pathwaymap04921
Longevity regulating pathway - mammalmap04211
Alcoholismmap05034


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000066s00006235.1PF00069.20Pkinase1213791.80E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.303
SRR1783600control15.580
SRR1783602moderate drought stress12.730
SRR1811619moderate drought stress12.912

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.401
DRR006520Root Summer glycyrrhizin high producing strain15.234
DRR006521Root Winter glycyrrhizin high producing strain9.561
DRR006522Root Winter glycyrrhizin high producing strain9.152
DRR006523Root Summer glycyrrhizin low producing strain11.857
DRR006524Root Summer glycyrrhizin low producing strain11.991
DRR006525Leaf Summer glycyrrhizin high producing strain15.453
DRR006526Leaf Summer glycyrrhizin high producing strain15.002

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.237
SRR2868004Drought Stress(Tissue:root)37.227
SRR2967015Control (Tissue:root)37.501

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.138
SRR9715740Leave25.806
SRR9715741Leave24.827
SRR9715739Root7.276
SRR9715742Root14.132
SRR9715743Root15.632

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.725
SRR8749028MeJA induced 9h34.585
SRR8749029MeJA induced 9h17.937
SRR8749030Uninduced32.835
SRR8749031Uninduced20.306
SRR8749032Uninduced18.310

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.571
SRR8400027Control-Root22.126

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved