Gene detail information of Glyur000070s00008036.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35790.1 | 0 | phospholipase D delta |
| NR | XP_004504195.1 | 0 | PREDICTED: phospholipase D delta-like [Cicer arietinum] |
| COG | YP_003981721.1 | 1.00E-23 | phospholipase D [Achromobacter xylosoxidans A8] |
| Swissprot | tr|Q9C5Y0|PLDD1_ARATH | 0 | Phospholipase D delta |
| trEMBL | tr|I1KSQ9|I1KSQ9_SOYBN | 0 | Phospholipase D {ECO:0000256|PIRNR:PIRNR036470} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00070 | 50907 | 56455 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000070s00008036.1 | PF00168.25 | C2 | 29 | 139 | 7.20E-21 |
| Glyur000070s00008036.1 | PF00614.17 | PLDc | 667 | 693 | 2.50E-08 |
| Glyur000070s00008036.1 | PF12357.3 | PLD_C | 739 | 811 | 1.10E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.044 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.043 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.055 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.040 |
| SRR2967015 | Control (Tissue:root) | 0.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.027 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.026 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.014 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |