Gene detail information of Glyur000100s00008364.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G11240.18.00E-167Calcineurin-like metallo-phosphoesterase superfamily protein
NRXP_004503668.10PREDICTED: serine/threonine-protein phosphatase PP1-like [Cicer arietinum]
COGYP_008797523.16.00E-42protein phosphatase [Candidatus Caldiarchaeum subterraneum]
Swissprottr|P48488|PP1_MEDSV0Serine/threonine-protein phosphatase PP1
trEMBLtr|V7CS56|V7CS56_PHAVU0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001009135494996+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06269PPP1C EC:3.1.3.16 mRNA surveillance pathway map03015
Hippo signaling pathwaymap04390
cAMP signaling pathwaymap04024
cGMP - PKG signaling pathwaymap04022
Meiosis - yeastmap04113
Oocyte meiosismap04114
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Platelet activationmap04611
Insulin signaling pathwaymap04910
Oxytocin signaling pathwaymap04921
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Inflammatory mediator regulation of TRP channelsmap04750
Proteoglycans in cancermap05205
Amphetamine addictionmap05031
Alcoholismmap05034
Insulin resistancemap04931
Herpes simplex infectionmap05168


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000100s00008364.1PF00149.23Metallophos552474.20E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.000
SRR1783600control23.261
SRR1783602moderate drought stress22.108
SRR1811619moderate drought stress21.795

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.972
DRR006520Root Summer glycyrrhizin high producing strain20.633
DRR006521Root Winter glycyrrhizin high producing strain14.938
DRR006522Root Winter glycyrrhizin high producing strain15.549
DRR006523Root Summer glycyrrhizin low producing strain25.445
DRR006524Root Summer glycyrrhizin low producing strain24.886
DRR006525Leaf Summer glycyrrhizin high producing strain16.669
DRR006526Leaf Summer glycyrrhizin high producing strain16.586

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.319
SRR2868004Drought Stress(Tissue:root)36.270
SRR2967015Control (Tissue:root)36.253

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.241
SRR9715740Leave36.884
SRR9715741Leave36.145
SRR9715739Root32.000
SRR9715742Root33.170
SRR9715743Root33.154

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.896
SRR8749028MeJA induced 9h29.086
SRR8749029MeJA induced 9h32.749
SRR8749030Uninduced15.648
SRR8749031Uninduced19.103
SRR8749032Uninduced15.045

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.673
SRR8400027Control-Root27.864

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved