Gene detail information of Glyur000103s00007411.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55260.10beta-hexosaminidase 1
NRXP_003555621.10PREDICTED: beta-hexosaminidase 1 [Glycine max]
COGYP_824350.17.00E-54beta-N-acetylhexosaminidase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|A7WM73|HEXO1_ARATH0Beta-hexosaminidase 1 (Precursor)
trEMBLtr|I1NJ56|I1NJ56_SOYBN0Beta-hexosaminidase {ECO:0000256|PIRNR:PIRNR001093}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0010322698541+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12373HEXA_B EC:3.2.1.52 Amino sugar and nucleotide sugar metabolism map00520
Various types of N-glycan biosynthesismap00513
Glycosaminoglycan degradationmap00531
Glycosphingolipid biosynthesis - globo and isoglobo seriesmap00603
Glycosphingolipid biosynthesis - ganglio seriesmap00604
Other glycan degradationmap00511
Lysosomemap04142


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0004563  beta-N-acetylhexosaminidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000103s00007411.1PF14845.1Glycohydro_20b2451371.90E-10
Glyur000103s00007411.1PF00728.17Glyco_hydro_201764991.90E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.626
SRR1783600control18.659
SRR1783602moderate drought stress11.840
SRR1811619moderate drought stress11.777

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.555
DRR006520Root Summer glycyrrhizin high producing strain10.307
DRR006521Root Winter glycyrrhizin high producing strain0.369
DRR006522Root Winter glycyrrhizin high producing strain0.314
DRR006523Root Summer glycyrrhizin low producing strain5.879
DRR006524Root Summer glycyrrhizin low producing strain5.361
DRR006525Leaf Summer glycyrrhizin high producing strain2.877
DRR006526Leaf Summer glycyrrhizin high producing strain2.608

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.105
SRR2868004Drought Stress(Tissue:root)28.642
SRR2967015Control (Tissue:root)27.539

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.262
SRR9715740Leave0.310
SRR9715741Leave0.716
SRR9715739Root13.268
SRR9715742Root20.014
SRR9715743Root18.163

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.735
SRR8749028MeJA induced 9h2.265
SRR8749029MeJA induced 9h2.855
SRR8749030Uninduced0.545
SRR8749031Uninduced0.358
SRR8749032Uninduced2.318

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root72.045
SRR8400027Control-Root71.340

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved