Gene detail information of Glyur000108s00010429.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G39090.12.00E-151Papain family cysteine protease
NRAAO11786.10pre-pro cysteine proteinase [Vicia faba]
COGYP_504536.13.00E-27peptidase C1A, papain [Methanospirillum hungatei JF-1]
Swissprottr|P25804|CYSP_PEA0Cysteine proteinase 15A (Precursor)
trEMBLtr|Q8GV06|Q8GV06_VICFA0Pre-pro cysteine proteinase {ECO:0000313|EMBL:AAO11786.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00108245230247918-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01373CTSF EC:3.4.22.41 Lysosome map04142
Apoptosismap04210


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008234  cysteine-type peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000108s00010429.1PF08246.7Inhibitor_I29551111.00E-12
Glyur000108s00010429.1PF00112.18Peptidase_C11383578.50E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2801.270
SRR1783600control2803.542
SRR1783602moderate drought stress4536.384
SRR1811619moderate drought stress4508.228

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3620.369
DRR006520Root Summer glycyrrhizin high producing strain3553.505
DRR006521Root Winter glycyrrhizin high producing strain2276.709
DRR006522Root Winter glycyrrhizin high producing strain2198.256
DRR006523Root Summer glycyrrhizin low producing strain2862.679
DRR006524Root Summer glycyrrhizin low producing strain2818.564
DRR006525Leaf Summer glycyrrhizin high producing strain2864.175
DRR006526Leaf Summer glycyrrhizin high producing strain2822.649

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1784.669
SRR2868004Drought Stress(Tissue:root)1828.170
SRR2967015Control (Tissue:root)2637.601

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1275.876
SRR9715740Leave1638.377
SRR9715741Leave1898.866
SRR9715739Root4384.815
SRR9715742Root2959.963
SRR9715743Root3152.207

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h734.744
SRR8749028MeJA induced 9h1008.739
SRR8749029MeJA induced 9h658.886
SRR8749030Uninduced387.545
SRR8749031Uninduced219.480
SRR8749032Uninduced535.318

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2197.273
SRR8400027Control-Root2149.187

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved