Gene detail information of Glyur000110s00011772.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G19450.20calcium-dependent protein kinase 19
NRXP_004513770.10PREDICTED: calcium-dependent protein kinase 8-like [Cicer arietinum]
COGYP_004904868.13.00E-24putative serine/threonine protein kinase [Kitasatospora setae KM-6054]
Swissprottr|Q42438|CDPK8_ARATH0Calcium-dependent protein kinase 8
trEMBLtr|A0A072VTY6|A0A072VTY6_MEDTR0Calmodulin-domain kinase CDPK protein {ECO:0000313|EMBL:KEH41585.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00110167069171335+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000110s00011772.1PF00069.20Pkinase471381.80E-19
Glyur000110s00011772.1PF00069.20Pkinase1392823.40E-43
Glyur000110s00011772.1PF13499.1EF-hand_73323896.80E-10
Glyur000110s00011772.1PF13499.1EF-hand_74024621.70E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.735
SRR1783600control19.848
SRR1783602moderate drought stress25.825
SRR1811619moderate drought stress25.372

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.068
DRR006520Root Summer glycyrrhizin high producing strain21.294
DRR006521Root Winter glycyrrhizin high producing strain52.233
DRR006522Root Winter glycyrrhizin high producing strain50.208
DRR006523Root Summer glycyrrhizin low producing strain38.701
DRR006524Root Summer glycyrrhizin low producing strain38.853
DRR006525Leaf Summer glycyrrhizin high producing strain19.711
DRR006526Leaf Summer glycyrrhizin high producing strain19.348

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.004
SRR2868004Drought Stress(Tissue:root)35.081
SRR2967015Control (Tissue:root)31.465

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave39.672
SRR9715740Leave34.246
SRR9715741Leave48.277
SRR9715739Root8.598
SRR9715742Root36.472
SRR9715743Root31.640

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h43.525
SRR8749028MeJA induced 9h56.439
SRR8749029MeJA induced 9h73.400
SRR8749030Uninduced88.849
SRR8749031Uninduced112.510
SRR8749032Uninduced99.239

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.179
SRR8400027Control-Root43.729

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved