Gene detail information of Glyur000117s00007672.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G09010.13.00E-31Protein kinase superfamily protein
NRXP_007159309.11.11E-76hypothetical protein PHAVU_002G227300g [Phaseolus vulgaris]
COGYP_001958461.17.00E-07hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|C0LGN2|Y3148_ARATH3.00E-27Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 (Precursor)
trEMBLtr|V7CPL9|V7CPL9_PHAVU4.00E-77Uncharacterized protein {ECO:0000313|EMBL:ESW31303.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00117285902290443+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000117s00007672.1PF07714.12Pkinase_Tyr501621.90E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.098
SRR1783600control10.376
SRR1783602moderate drought stress8.969
SRR1811619moderate drought stress8.996

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.957
DRR006520Root Summer glycyrrhizin high producing strain6.966
DRR006521Root Winter glycyrrhizin high producing strain11.032
DRR006522Root Winter glycyrrhizin high producing strain10.564
DRR006523Root Summer glycyrrhizin low producing strain8.816
DRR006524Root Summer glycyrrhizin low producing strain9.075
DRR006525Leaf Summer glycyrrhizin high producing strain8.100
DRR006526Leaf Summer glycyrrhizin high producing strain8.327

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.642
SRR2868004Drought Stress(Tissue:root)14.305
SRR2967015Control (Tissue:root)11.465

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.980
SRR9715740Leave16.867
SRR9715741Leave22.047
SRR9715739Root2.107
SRR9715742Root6.597
SRR9715743Root6.922

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.949
SRR8749028MeJA induced 9h16.970
SRR8749029MeJA induced 9h20.023
SRR8749030Uninduced18.900
SRR8749031Uninduced10.270
SRR8749032Uninduced12.999

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.540
SRR8400027Control-Root9.529

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved