Gene detail information of Glyur000123s00008417.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G28940.25.00E-149Protein kinase superfamily protein
NRXP_004505859.10PREDICTED: probable receptor-like protein kinase At5g15080-like [Cicer arietinum]
COGYP_005517714.13.00E-24serine/threonine protein kinase with PASTA sensor(s) [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1]
Swissprottr|Q9LTC0|Y5707_ARATH2.00E-114Probable receptor-like protein kinase At5g47070
trEMBLtr|I1LQQ2|I1LQQ2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G06750.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001238345486506+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000123s00008417.1PF00069.20Pkinase1063901.30E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.257
SRR1783600control13.532
SRR1783602moderate drought stress18.221
SRR1811619moderate drought stress18.372

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.670
DRR006520Root Summer glycyrrhizin high producing strain19.068
DRR006521Root Winter glycyrrhizin high producing strain33.625
DRR006522Root Winter glycyrrhizin high producing strain32.791
DRR006523Root Summer glycyrrhizin low producing strain16.708
DRR006524Root Summer glycyrrhizin low producing strain16.505
DRR006525Leaf Summer glycyrrhizin high producing strain8.698
DRR006526Leaf Summer glycyrrhizin high producing strain8.163

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.383
SRR2868004Drought Stress(Tissue:root)37.263
SRR2967015Control (Tissue:root)39.108

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.897
SRR9715740Leave13.847
SRR9715741Leave22.989
SRR9715739Root12.683
SRR9715742Root15.005
SRR9715743Root13.271

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.694
SRR8749028MeJA induced 9h14.824
SRR8749029MeJA induced 9h18.045
SRR8749030Uninduced16.526
SRR8749031Uninduced18.178
SRR8749032Uninduced19.304

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.614
SRR8400027Control-Root29.182

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved