Gene detail information of Glyur000125s00010009.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G04510.16.00E-773'-phosphoinositide-dependent protein kinase 1
NRXP_003536298.13.33E-113PREDICTED: 3-phosphoinositide-dependent protein kinase 2-like [Glycine max]
COGYP_004223283.15.00E-15serine/threonine protein kinase [Microbacterium testaceum StLB037]
Swissprottr|Q9XF67|PDPK1_ARATH4.00E-993-phosphoinositide-dependent protein kinase 1
trEMBLtr|I1LCP7|I1LCP7_SOYBN1.00E-113Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G34430.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001255225064029+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06276PDPK1 EC:2.7.11.1 MAPK signaling pathway - yeast map04011
FoxO signaling pathwaymap04068
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Apoptosismap04210
Focal adhesionmap04510
T cell receptor signaling pathwaymap04660
Fc epsilon RI signaling pathwaymap04664
Insulin signaling pathwaymap04910
PPAR signaling pathwaymap03320
Thyroid hormone signaling pathwaymap04919
Aldosterone-regulated sodium reabsorptionmap04960
Neurotrophin signaling pathwaymap04722
Choline metabolism in cancermap05231
Proteoglycans in cancermap05205
Prostate cancermap05215
Endometrial cancermap05213
Non-small cell lung cancermap05223
Insulin resistancemap04931
Hepatitis Cmap05160
Toxoplasmosismap05145
Platinum drug resistancemap01524


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000125s00010009.1PF00069.20Pkinase521788.70E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.949
SRR1783600control19.723
SRR1783602moderate drought stress9.859
SRR1811619moderate drought stress10.931

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.593
DRR006520Root Summer glycyrrhizin high producing strain16.140
DRR006521Root Winter glycyrrhizin high producing strain4.631
DRR006522Root Winter glycyrrhizin high producing strain4.657
DRR006523Root Summer glycyrrhizin low producing strain14.635
DRR006524Root Summer glycyrrhizin low producing strain14.956
DRR006525Leaf Summer glycyrrhizin high producing strain8.486
DRR006526Leaf Summer glycyrrhizin high producing strain7.547

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.630
SRR2868004Drought Stress(Tissue:root)14.896
SRR2967015Control (Tissue:root)15.771

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.918
SRR9715740Leave4.788
SRR9715741Leave8.298
SRR9715739Root1.979
SRR9715742Root7.609
SRR9715743Root9.189

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.036
SRR8749028MeJA induced 9h12.362
SRR8749029MeJA induced 9h6.464
SRR8749030Uninduced2.622
SRR8749031Uninduced2.497
SRR8749032Uninduced2.333

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.400
SRR8400027Control-Root30.400

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved