Gene detail information of Glyur000140s00011489.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G66210.20calcium-dependent protein kinase 28
NRXP_004512135.10PREDICTED: calcium-dependent protein kinase 16-like [Cicer arietinum]
COGYP_003372407.11.00E-27serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|Q7XJR9|CDPKG_ARATH0Calcium-dependent protein kinase 16
trEMBLtr|V7CKU1|V7CKU1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW29910.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00140307174312863+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000140s00011489.1PF00069.20Pkinase1073661.00E-65
Glyur000140s00011489.1PF13499.1EF-hand_74144747.20E-10
Glyur000140s00011489.1PF13499.1EF-hand_74965463.50E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.299
SRR1783600control17.307
SRR1783602moderate drought stress14.976
SRR1811619moderate drought stress15.032

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.491
DRR006520Root Summer glycyrrhizin high producing strain23.312
DRR006521Root Winter glycyrrhizin high producing strain10.076
DRR006522Root Winter glycyrrhizin high producing strain9.752
DRR006523Root Summer glycyrrhizin low producing strain73.258
DRR006524Root Summer glycyrrhizin low producing strain73.205
DRR006525Leaf Summer glycyrrhizin high producing strain9.449
DRR006526Leaf Summer glycyrrhizin high producing strain9.316

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)50.491
SRR2868004Drought Stress(Tissue:root)90.870
SRR2967015Control (Tissue:root)58.411

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave41.408
SRR9715740Leave32.854
SRR9715741Leave61.659
SRR9715739Root18.910
SRR9715742Root50.153
SRR9715743Root41.770

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h53.309
SRR8749028MeJA induced 9h56.407
SRR8749029MeJA induced 9h69.270
SRR8749030Uninduced145.952
SRR8749031Uninduced105.189
SRR8749032Uninduced102.599

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.982
SRR8400027Control-Root48.973

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved