Gene detail information of Glyur000148s00009042.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G27840.22.00E-157Calcineurin-like metallo-phosphoesterase superfamily protein
NRKHN03964.10Serine/threonine-protein phosphatase PP1 [Glycine soja]
COGYP_004458109.14.00E-43metallophosphoesterase [Acidianus hospitalis W1]
Swissprottr|P48490|PP1_PHAVU0Serine/threonine-protein phosphatase PP1
trEMBLtr|Q84T16|Q84T16_PHAAT0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001488419488529+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06269PPP1C EC:3.1.3.16 mRNA surveillance pathway map03015
Hippo signaling pathwaymap04390
cAMP signaling pathwaymap04024
cGMP - PKG signaling pathwaymap04022
Meiosis - yeastmap04113
Oocyte meiosismap04114
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Platelet activationmap04611
Insulin signaling pathwaymap04910
Oxytocin signaling pathwaymap04921
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Inflammatory mediator regulation of TRP channelsmap04750
Proteoglycans in cancermap05205
Amphetamine addictionmap05031
Alcoholismmap05034
Insulin resistancemap04931
Herpes simplex infectionmap05168


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000148s00009042.1PF00149.23Metallophos612537.10E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.361
SRR1783600control20.407
SRR1783602moderate drought stress18.747
SRR1811619moderate drought stress18.618

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.590
DRR006520Root Summer glycyrrhizin high producing strain20.520
DRR006521Root Winter glycyrrhizin high producing strain21.905
DRR006522Root Winter glycyrrhizin high producing strain20.835
DRR006523Root Summer glycyrrhizin low producing strain36.236
DRR006524Root Summer glycyrrhizin low producing strain35.352
DRR006525Leaf Summer glycyrrhizin high producing strain26.953
DRR006526Leaf Summer glycyrrhizin high producing strain26.601

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.341
SRR2868004Drought Stress(Tissue:root)27.776
SRR2967015Control (Tissue:root)28.956

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.995
SRR9715740Leave26.224
SRR9715741Leave19.395
SRR9715739Root8.601
SRR9715742Root16.520
SRR9715743Root15.767

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.871
SRR8749028MeJA induced 9h42.972
SRR8749029MeJA induced 9h29.850
SRR8749030Uninduced68.915
SRR8749031Uninduced95.689
SRR8749032Uninduced52.130

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.624
SRR8400027Control-Root23.790

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved