Gene detail information of Glyur000154s00013395.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22050.2 | 3.00E-73 | Protein kinase superfamily protein |
| NR | XP_004487442.1 | 1.45E-173 | PREDICTED: probable receptor-like protein kinase At1g49730-like [Cicer arietinum] |
| COG | YP_003894027.1 | 8.00E-07 | serine/threonine protein kinase [Methanoplanus petrolearius DSM 11571] |
| Swissprot | tr|Q9FX99|Y1497_ARATH | 3.00E-33 | Probable receptor-like protein kinase At1g49730 (Precursor) |
| trEMBL | tr|G7IRG8|G7IRG8_MEDTR | 5.00E-165 | Receptor-like kinase {ECO:0000313|EMBL:AES67170.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00154 | 40218 | 42990 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.913 |
| SRR1783600 | control | 1.885 |
| SRR1783602 | moderate drought stress | 2.939 |
| SRR1811619 | moderate drought stress | 2.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.035 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.797 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.063 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.076 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.305 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.111 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.165 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.454 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.700 |
| SRR2967015 | Control (Tissue:root) | 5.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.610 |
| SRR9715740 | Leave | 3.217 |
| SRR9715741 | Leave | 3.602 |
| SRR9715739 | Root | 0.972 |
| SRR9715742 | Root | 3.148 |
| SRR9715743 | Root | 2.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.556 |
| SRR8749028 | MeJA induced 9h | 3.821 |
| SRR8749029 | MeJA induced 9h | 2.085 |
| SRR8749030 | Uninduced | 2.159 |
| SRR8749031 | Uninduced | 0.823 |
| SRR8749032 | Uninduced | 1.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.625 |
| SRR8400027 | Control-Root | 7.274 |