Gene detail information of Glyur000163s00011090.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G27730.1 | 3.00E-132 | Protein of unknown function (DUF1624) |
| NR | XP_007162785.1 | 0 | hypothetical protein PHAVU_001G180300g [Phaseolus vulgaris] |
| COG | YP_007146222.1 | 2.00E-21 | hypothetical protein Cylst_1247 [Cylindrospermum stagnale PCC 7417] |
| trEMBL | tr|I1NAC2|I1NAC2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G36920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00163 | 9193 | 14434 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K10532 | HGSNAT | EC:2.3.1.78 | Glycosaminoglycan degradation | map00531 |
| Lysosome | map04142 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.051 |
| SRR1783600 | control | 0.037 |
| SRR1783602 | moderate drought stress | 0.037 |
| SRR1811619 | moderate drought stress | 0.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.128 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.151 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.804 |
| SRR2967015 | Control (Tissue:root) | 1.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.047 |
| SRR9715740 | Leave | 0.044 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.102 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.042 |
| SRR8749028 | MeJA induced 9h | 0.031 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.026 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.273 |
| SRR8400027 | Control-Root | 0.168 |