Gene detail information of Glyur000178s00013218.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G45310.12.00E-145Cysteine proteinases superfamily protein
NRXP_004507996.10PREDICTED: thiol protease aleurain-like isoform X1 [Cicer arietinum]
COGYP_504536.15.00E-33peptidase C1A, papain [Methanospirillum hungatei JF-1]
Swissprottr|Q8RWQ9|ALEUL_ARATH0Thiol protease aleurain-like (Precursor)
trEMBLtr|A0A072UTP9|A0A072UTP9_MEDTR0Papain family cysteine protease {ECO:0000313|EMBL:KEH32433.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00178224282227505+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01366CTSH EC:3.4.22.16 Lysosome map04142
Apoptosismap04210


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008234  cysteine-type peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000178s00013218.1PF08246.7Inhibitor_I29501064.50E-15
Glyur000178s00013218.1PF00112.18Peptidase_C11323382.40E-76


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control352.898
SRR1783600control354.220
SRR1783602moderate drought stress1419.737
SRR1811619moderate drought stress1412.700

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1437.278
DRR006520Root Summer glycyrrhizin high producing strain1423.313
DRR006521Root Winter glycyrrhizin high producing strain744.931
DRR006522Root Winter glycyrrhizin high producing strain725.780
DRR006523Root Summer glycyrrhizin low producing strain2147.222
DRR006524Root Summer glycyrrhizin low producing strain2145.828
DRR006525Leaf Summer glycyrrhizin high producing strain810.656
DRR006526Leaf Summer glycyrrhizin high producing strain807.966

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)980.014
SRR2868004Drought Stress(Tissue:root)1274.561
SRR2967015Control (Tissue:root)1281.904

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave833.621
SRR9715740Leave1029.944
SRR9715741Leave1332.560
SRR9715739Root1543.637
SRR9715742Root697.878
SRR9715743Root856.410

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h379.252
SRR8749028MeJA induced 9h685.040
SRR8749029MeJA induced 9h383.421
SRR8749030Uninduced555.310
SRR8749031Uninduced296.042
SRR8749032Uninduced679.144

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root703.438
SRR8400027Control-Root649.498

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved