Gene detail information of Glyur000191s00015611.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G32940.10gamma vacuolar processing enzyme
NRXP_004501477.10PREDICTED: vacuolar-processing enzyme-like [Cicer arietinum]
COGYP_004254713.15.00E-23Legumain [Odoribacter splanchnicus DSM 220712]
Swissprottr|P49043|VPE_CITSI0Vacuolar-processing enzyme (Precursor)
trEMBLtr|I1K8B5|I1K8B5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G05350.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001912978334370-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01369LGMN EC:3.4.22.34 Lysosome map04142
Antigen processing and presentationmap04612


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008233  peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000191s00015611.1PF01650.13Peptidase_C13563261.70E-109


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control136.433
SRR1783600control136.890
SRR1783602moderate drought stress223.827
SRR1811619moderate drought stress221.574

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain251.133
DRR006520Root Summer glycyrrhizin high producing strain247.728
DRR006521Root Winter glycyrrhizin high producing strain153.418
DRR006522Root Winter glycyrrhizin high producing strain148.179
DRR006523Root Summer glycyrrhizin low producing strain257.541
DRR006524Root Summer glycyrrhizin low producing strain259.188
DRR006525Leaf Summer glycyrrhizin high producing strain167.428
DRR006526Leaf Summer glycyrrhizin high producing strain166.407

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)129.655
SRR2868004Drought Stress(Tissue:root)183.215
SRR2967015Control (Tissue:root)190.735

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave174.694
SRR9715740Leave218.308
SRR9715741Leave184.764
SRR9715739Root190.132
SRR9715742Root139.036
SRR9715743Root153.101

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h96.292
SRR8749028MeJA induced 9h114.926
SRR8749029MeJA induced 9h76.679
SRR8749030Uninduced93.747
SRR8749031Uninduced80.609
SRR8749032Uninduced114.088

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root169.058
SRR8400027Control-Root173.501

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved