Gene detail information of Glyur000191s00015639.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42440.11.00E-101Protein kinase superfamily protein
NRXP_003592066.10Serine/threonine protein kinase-like protein [Medicago truncatula]
COGYP_002524068.17.00E-21serine/threonine-protein kinase PksC [Thermomicrobium roseum DSM 5159]
Swissprottr|Q9FN37|PSKR2_ARATH3.00E-71Phytosulfokine receptor 2 (Precursor)
trEMBLtr|G7IBW3|G7IBW3_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES62317.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00191210502211620-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000191s00015639.1PF00069.20Pkinase913021.90E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.598
SRR1783600control11.345
SRR1783602moderate drought stress10.128
SRR1811619moderate drought stress9.563

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.860
DRR006520Root Summer glycyrrhizin high producing strain28.873
DRR006521Root Winter glycyrrhizin high producing strain2.569
DRR006522Root Winter glycyrrhizin high producing strain2.128
DRR006523Root Summer glycyrrhizin low producing strain63.503
DRR006524Root Summer glycyrrhizin low producing strain64.369
DRR006525Leaf Summer glycyrrhizin high producing strain18.666
DRR006526Leaf Summer glycyrrhizin high producing strain19.455

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.279
SRR2868004Drought Stress(Tissue:root)37.279
SRR2967015Control (Tissue:root)60.624

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave38.689
SRR9715740Leave31.207
SRR9715741Leave46.942
SRR9715739Root82.175
SRR9715742Root72.281
SRR9715743Root70.825

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.162
SRR8749028MeJA induced 9h17.273
SRR8749029MeJA induced 9h14.224
SRR8749030Uninduced23.399
SRR8749031Uninduced3.290
SRR8749032Uninduced13.132

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.303
SRR8400027Control-Root30.212

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved