Gene detail information of Glyur000204s00012401.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74740.10calcium-dependent protein kinase 30
NRXP_004508790.10PREDICTED: calcium-dependent protein kinase 10-like [Cicer arietinum]
COGYP_642814.12.00E-31serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q9SSF8|CDPKU_ARATH0Calcium-dependent protein kinase 30
trEMBLtr|A0A072V1D7|A0A072V1D7_MEDTR0Calmodulin-domain kinase CDPK protein {ECO:0000313|EMBL:KEH31900.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002047308077284+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000204s00012401.1PF00069.20Pkinase673171.00E-65
Glyur000204s00012401.1PF13499.1EF-hand_73654231.10E-11
Glyur000204s00012401.1PF13499.1EF-hand_74384975.70E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.481
SRR1783600control8.529
SRR1783602moderate drought stress8.935
SRR1811619moderate drought stress9.306

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.434
DRR006520Root Summer glycyrrhizin high producing strain12.848
DRR006521Root Winter glycyrrhizin high producing strain26.084
DRR006522Root Winter glycyrrhizin high producing strain25.056
DRR006523Root Summer glycyrrhizin low producing strain29.026
DRR006524Root Summer glycyrrhizin low producing strain29.460
DRR006525Leaf Summer glycyrrhizin high producing strain16.432
DRR006526Leaf Summer glycyrrhizin high producing strain15.864

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)56.743
SRR2868004Drought Stress(Tissue:root)81.016
SRR2967015Control (Tissue:root)113.938

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.466
SRR9715740Leave29.755
SRR9715741Leave41.918
SRR9715739Root8.060
SRR9715742Root19.120
SRR9715743Root15.976

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h51.723
SRR8749028MeJA induced 9h58.199
SRR8749029MeJA induced 9h53.759
SRR8749030Uninduced55.766
SRR8749031Uninduced74.455
SRR8749032Uninduced63.701

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.510
SRR8400027Control-Root50.515

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved