Gene detail information of Glyur000213s00016097.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G23770.13.00E-97protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
NRKHN12737.10Leucine-rich repeat receptor protein kinase EXS [Glycine soja]
COGYP_003372407.16.00E-20serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|O64825|LYK4_ARATH3.00E-129LysM domain receptor-like kinase 4 (Precursor)
trEMBLtr|I1M8G4|I1M8G4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G08440.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00213137831139765+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000213s00016097.1PF07714.12Pkinase_Tyr3576181.00E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.030
SRR1783600control2.694
SRR1783602moderate drought stress2.758
SRR1811619moderate drought stress2.719

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.281
DRR006520Root Summer glycyrrhizin high producing strain6.352
DRR006521Root Winter glycyrrhizin high producing strain1.784
DRR006522Root Winter glycyrrhizin high producing strain1.965
DRR006523Root Summer glycyrrhizin low producing strain18.190
DRR006524Root Summer glycyrrhizin low producing strain17.432
DRR006525Leaf Summer glycyrrhizin high producing strain0.240
DRR006526Leaf Summer glycyrrhizin high producing strain0.239

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.584
SRR2868004Drought Stress(Tissue:root)6.446
SRR2967015Control (Tissue:root)8.721

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.049
SRR9715740Leave0.296
SRR9715741Leave0.749
SRR9715739Root4.852
SRR9715742Root7.068
SRR9715743Root5.558

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h66.798
SRR8749028MeJA induced 9h61.220
SRR8749029MeJA induced 9h68.573
SRR8749030Uninduced92.909
SRR8749031Uninduced36.177
SRR8749032Uninduced52.027

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.305
SRR8400027Control-Root4.327

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved