Gene detail information of Glyur000217s00014838.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G09570.10calcium-dependent protein kinase 4
NRXP_004496370.10PREDICTED: calcium-dependent protein kinase 4-like [Cicer arietinum]
COGYP_642814.13.00E-27serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q38869|CDPK4_ARATH0Calcium-dependent protein kinase 4
trEMBLtr|A0A072VP17|A0A072VP17_MEDTR0Calmodulin-domain kinase CDPK protein {ECO:0000313|EMBL:KEH43562.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002174279946457+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000217s00014838.1PF00069.20Pkinase733296.70E-73
Glyur000217s00014838.1PF13499.1EF-hand_73774361.20E-13
Glyur000217s00014838.1PF13499.1EF-hand_74525072.60E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.137
SRR1783600control13.355
SRR1783602moderate drought stress15.806
SRR1811619moderate drought stress15.766

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.721
DRR006520Root Summer glycyrrhizin high producing strain27.664
DRR006521Root Winter glycyrrhizin high producing strain28.253
DRR006522Root Winter glycyrrhizin high producing strain27.284
DRR006523Root Summer glycyrrhizin low producing strain39.100
DRR006524Root Summer glycyrrhizin low producing strain38.861
DRR006525Leaf Summer glycyrrhizin high producing strain10.152
DRR006526Leaf Summer glycyrrhizin high producing strain10.097

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.354
SRR2868004Drought Stress(Tissue:root)54.606
SRR2967015Control (Tissue:root)55.304

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.125
SRR9715740Leave27.778
SRR9715741Leave22.311
SRR9715739Root2.422
SRR9715742Root20.406
SRR9715743Root16.365

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.793
SRR8749028MeJA induced 9h8.815
SRR8749029MeJA induced 9h5.284
SRR8749030Uninduced5.085
SRR8749031Uninduced4.652
SRR8749032Uninduced5.189

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.234
SRR8400027Control-Root32.772

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved