Gene detail information of Glyur000221s00012518.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G35790.12.00E-75phospholipase D delta
NRAFK40898.11.91E-119unknown [Lotus japonicus]
COGYP_283626.11.00E-07phospholipase D/transphosphatidylase [Dechloromonas aromatica RCB]
Swissprottr|Q9C5Y0|PLDD1_ARATH2.00E-87Phospholipase D delta
trEMBLtr|I3SKV6|I3SKV6_LOTJA7.00E-120Uncharacterized protein {ECO:0000313|EMBL:AFK40898.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00221156832159666-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01115PLD1_2 EC:3.1.4.4 Glycerophospholipid metabolism map00564
Ether lipid metabolismmap00565
Ras signaling pathwaymap04014
Phospholipase D signaling pathwaymap04072
Sphingolipid signaling pathwaymap04071
cAMP signaling pathwaymap04024
Endocytosismap04144
Fc gamma R-mediated phagocytosismap04666
GnRH signaling pathwaymap04912
Glutamatergic synapsemap04724
Choline metabolism in cancermap05231


Gene Ontology

molecular_function

GO:0003824  catalytic activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000221s00012518.1PF00614.17PLDc48743.80E-09
Glyur000221s00012518.1PF12357.3PLD_C1211929.50E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.098
SRR1783600control18.140
SRR1783602moderate drought stress17.460
SRR1811619moderate drought stress16.732

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.898
DRR006520Root Summer glycyrrhizin high producing strain17.765
DRR006521Root Winter glycyrrhizin high producing strain25.296
DRR006522Root Winter glycyrrhizin high producing strain22.830
DRR006523Root Summer glycyrrhizin low producing strain22.157
DRR006524Root Summer glycyrrhizin low producing strain22.715
DRR006525Leaf Summer glycyrrhizin high producing strain11.409
DRR006526Leaf Summer glycyrrhizin high producing strain11.161

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.226
SRR2868004Drought Stress(Tissue:root)32.148
SRR2967015Control (Tissue:root)23.472

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.411
SRR9715740Leave13.997
SRR9715741Leave13.792
SRR9715739Root7.123
SRR9715742Root15.420
SRR9715743Root13.324

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h41.258
SRR8749028MeJA induced 9h39.540
SRR8749029MeJA induced 9h149.684
SRR8749030Uninduced24.457
SRR8749031Uninduced39.579
SRR8749032Uninduced96.127

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.965
SRR8400027Control-Root22.742

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved