Gene detail information of Glyur000224s00017379.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06740.18.00E-99Concanavalin A-like lectin protein kinase family protein
NRKEH41309.10lectin receptor kinase [Medicago truncatula]
COGYP_004571825.15.00E-28serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9FG33|LRKS5_ARATH3.00E-118Probable L-type lectin-domain containing receptor kinase S.5 (Precursor)
trEMBLtr|A0A072VGZ3|A0A072VGZ3_MEDTR0Lectin receptor kinase {ECO:0000313|EMBL:KEH41309.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00224139829143409+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04733IRAK4 EC:2.7.11.1 NF-kappa B signaling pathway map04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722
Pertussismap05133
Tuberculosismap05152
Measlesmap05162
Influenza Amap05164
Toxoplasmosismap05145
Leishmaniasismap05140
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000224s00017379.1PF00139.14Lectin_legB302666.80E-37
Glyur000224s00017379.1PF00069.20Pkinase3496073.10E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.036
SRR1783600control0.018
SRR1783602moderate drought stress0.074
SRR1811619moderate drought stress0.072

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.013
DRR006521Root Winter glycyrrhizin high producing strain1.879
DRR006522Root Winter glycyrrhizin high producing strain2.057
DRR006523Root Summer glycyrrhizin low producing strain0.055
DRR006524Root Summer glycyrrhizin low producing strain0.055
DRR006525Leaf Summer glycyrrhizin high producing strain1.191
DRR006526Leaf Summer glycyrrhizin high producing strain1.238

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.043
SRR2868004Drought Stress(Tissue:root)0.133
SRR2967015Control (Tissue:root)0.129

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.524
SRR9715740Leave0.153
SRR9715741Leave1.430
SRR9715739Root0.072
SRR9715742Root0.072
SRR9715743Root0.026

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.158
SRR8749028MeJA induced 9h0.798
SRR8749029MeJA induced 9h0.525
SRR8749030Uninduced0.160
SRR8749031Uninduced2.648
SRR8749032Uninduced1.353

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.804
SRR8400027Control-Root0.389

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved