Gene detail information of Glyur000282s00015763.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G35670.10calcium-dependent protein kinase 2
NRXP_004503020.10PREDICTED: calcium-dependent protein kinase SK5-like [Cicer arietinum]
COGYP_642814.14.00E-30serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|P28583|CDPK_SOYBN0Calcium-dependent protein kinase SK5
trEMBLtr|V7AZ01|V7AZ01_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW09833.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00282102302107315-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13412CPK EC:2.7.11.1 Plant-pathogen interaction map04626
Toxoplasmosismap05145


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005509  calcium ion binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000282s00015763.1PF00069.20Pkinase272858.40E-75
Glyur000282s00015763.1PF13499.1EF-hand_73333921.20E-12
Glyur000282s00015763.1PF13499.1EF-hand_74054632.20E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control47.083
SRR1783600control47.685
SRR1783602moderate drought stress37.185
SRR1811619moderate drought stress36.820

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain60.462
DRR006520Root Summer glycyrrhizin high producing strain59.954
DRR006521Root Winter glycyrrhizin high producing strain17.095
DRR006522Root Winter glycyrrhizin high producing strain16.757
DRR006523Root Summer glycyrrhizin low producing strain55.171
DRR006524Root Summer glycyrrhizin low producing strain55.054
DRR006525Leaf Summer glycyrrhizin high producing strain14.615
DRR006526Leaf Summer glycyrrhizin high producing strain14.603

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.643
SRR2868004Drought Stress(Tissue:root)41.834
SRR2967015Control (Tissue:root)45.279

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.939
SRR9715740Leave22.678
SRR9715741Leave26.911
SRR9715739Root10.005
SRR9715742Root29.503
SRR9715743Root25.249

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h47.075
SRR8749028MeJA induced 9h41.146
SRR8749029MeJA induced 9h40.233
SRR8749030Uninduced15.487
SRR8749031Uninduced2.750
SRR8749032Uninduced4.320

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.971
SRR8400027Control-Root51.556

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved